CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = Y40L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a40Y40LnonsyntACtTA40290.72527511-27513
ORF7a40Y40LnonsyntACtTG4070.17527511-27513
ORF7a40Y40LnonsynTAcCTc4040.127511-27513

Details of the mutation Y40L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a40Y40LtACtTA2940All0.000006
ORF7a40Y40LtACtTG740All0.000001
ORF7a40Y40LTAcCTc440All0.000001
ORF7a40Y40LtACtTA910B.10.000082
ORF7a40Y40LtACtTG110B.10.000009
ORF7a40Y40LtACtTG69B.1.617.20.000023
ORF7a40Y40LtACtTA39B.1.617.20.000011
ORF7a40Y40LtACtTA57B.1.1.70.000004
ORF7a40Y40LTAcCTc27B.1.1.70.000002
ORF7a40Y40LtACtTA66AY.250.000036
ORF7a40Y40LtACtTA22B.1.10.000036
ORF7a40Y40LtACtTA11AY.1030.000006
ORF7a40Y40LTAcCTc11AY.1100.000113
ORF7a40Y40LTAcCTc11AY.3.10.000085
ORF7a40Y40LtACtTA11AY.440.000006
ORF7a40Y40LtACtTA11B.1.1600.000031
ORF7a40Y40LtACtTA11B.1.5760.000907