CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = Y40F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a40Y40FnonsyntActTc92590.64130427511-27513
ORF7a40Y40FnonsyntACtTT92330.35869627511-27513

Details of the mutation Y40F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a40Y40FtActTc5992All0.000011
ORF7a40Y40FtACtTT3392All0.000006
ORF7a40Y40FtActTc1722B.10.000156
ORF7a40Y40FtACtTT522B.10.000046
ORF7a40Y40FtACtTT810B.1.617.20.00003
ORF7a40Y40FtActTc210B.1.617.20.000008
ORF7a40Y40FtACtTT68AY.250.000036
ORF7a40Y40FtActTc28AY.250.000012
ORF7a40Y40FtActTc56B.1.1.70.000004
ORF7a40Y40FtACtTT16B.1.1.70.000001
ORF7a40Y40FtACtTT24AY.30.00002
ORF7a40Y40FtActTc24AY.30.00002
ORF7a40Y40FtACtTT44AY.3.10.000341
ORF7a40Y40FtActTc34B.1.1600.000094
ORF7a40Y40FtACtTT14B.1.1600.000031
ORF7a40Y40FtActTc34B.1.1770.00004
ORF7a40Y40FtACtTT14B.1.1770.000013
ORF7a40Y40FtActTc33B.1.1.3110.001074
ORF7a40Y40FtActTc23B.1.2580.000133
ORF7a40Y40FtACtTT13B.1.2580.000067
ORF7a40Y40FtActTc22AY.1030.000012
ORF7a40Y40FtACtTT12AY.260.000028
ORF7a40Y40FtActTc12AY.260.000028
ORF7a40Y40FtActTc22AY.40.000003
ORF7a40Y40FtActTc22AY.440.000012
ORF7a40Y40FtACtTT12B.1.10.000018
ORF7a40Y40FtActTc12B.1.10.000018
ORF7a40Y40FtActTc11AY.240.000431
ORF7a40Y40FtActTc11AY.270.000065
ORF7a40Y40FtACtTT11AY.39.10.00004
ORF7a40Y40FtActTc11AY.850.000427
ORF7a40Y40FtActTc11B.1.177.70.000165
ORF7a40Y40FtActTc11B.1.177.810.000189
ORF7a40Y40FtActTc11B.1.2210.000071
ORF7a40Y40FtActTc11B.1.360.000146
ORF7a40Y40FtActTc11B.1.36.220.001208
ORF7a40Y40FtActTc11B.1.4270.00005
ORF7a40Y40FtActTc11B.1.4290.000024
ORF7a40Y40FtActTc11B.1.5650.00081
ORF7a40Y40FtACtTT11B.1.5760.000907
ORF7a40Y40FtActTc11D.20.000075