CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = X122del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a122X122del2delTGa--a1871860.99465227757-27759
ORF7a122X122del2deltGAt--18710.0053475927757-27759

Details of the mutation X122del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a122X122del2TGa--a186187All0.000036
ORF7a122X122del2tGAt--1187All0
ORF7a122X122del2TGa--a118118B.1.1.70.000106
ORF7a122X122del2TGa--a99AY.40.000014
ORF7a122X122del2TGa--a77B.1.4270.000353
ORF7a122X122del2TGa--a55B.1.10.000091
ORF7a122X122del2TGa--a55B.1.617.20.000019
ORF7a122X122del2TGa--a44AY.30.00004
ORF7a122X122del2TGa--a33AY.440.000018
ORF7a122X122del2TGa--a33B.1.20.000026
ORF7a122X122del2TGa--a33B.1.2430.000209
ORF7a122X122del2TGa--a33B.1.258.170.000312
ORF7a122X122del2TGa--a33P.10.000047
ORF7a122X122del2TGa--a22AY.1170.000169
ORF7a122X122del2TGa--a22AY.260.000057
ORF7a122X122del2TGa--a22AY.390.000049
ORF7a122X122del2TGa--a22B.10.000018
ORF7a122X122del2TGa--a22B.1.1.2140.000111
ORF7a122X122del2TGa--a22B.1.1.3180.000604
ORF7a122X122del2TGa--a22B.1.3510.000059
ORF7a122X122del2tGAt--11AY.1030.000006
ORF7a122X122del2TGa--a11AY.1160.000287
ORF7a122X122del2TGa--a11AY.250.000006
ORF7a122X122del2TGa--a11AY.60.000041
ORF7a122X122del2TGa--a11B.1.5250.000113
ORF7a122X122del2TGa--a11B.1.6210.000089
ORF7a122X122del2TGa--a11B.1.6370.000073
ORF7a122X122del2TGa--a11B.120.00641
ORF7a122X122del2TGa--a11P.1.150.000232
ORF7a122X122del2TGa--a11P.1.170.000162