CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = X122del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a122X122del1deltgAtg-99560.56565727757-27759
ORF7a122X122del1delTga-ga99370.37373727757-27759
ORF7a122X122del1deltGat-a9960.060606127757-27759

Details of the mutation X122del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a122X122del1tgAtg-5699All0.000011
ORF7a122X122del1Tga-ga3799All0.000007
ORF7a122X122del1tGat-a699All0.000001
ORF7a122X122del1tgAtg-3345B.1.1.70.00003
ORF7a122X122del1Tga-ga1045B.1.1.70.000009
ORF7a122X122del1tGat-a245B.1.1.70.000002
ORF7a122X122del1Tga-ga55AY.1030.000031
ORF7a122X122del1Tga-ga55AY.250.00003
ORF7a122X122del1Tga-ga45P.10.000063
ORF7a122X122del1tgAtg-15P.10.000016
ORF7a122X122del1tgAtg-23B.10.000018
ORF7a122X122del1tGat-a13B.10.000009
ORF7a122X122del1tgAtg-33B.1.1.370.000579
ORF7a122X122del1Tga-ga33B.1.177.210.000229
ORF7a122X122del1tgAtg-23B.1.20.000018
ORF7a122X122del1Tga-ga13B.1.20.000009
ORF7a122X122del1tGat-a33B.1.4290.000071
ORF7a122X122del1tgAtg-23B.1.5960.000174
ORF7a122X122del1Tga-ga13B.1.5960.000087
ORF7a122X122del1tgAtg-22AY.1020.000053
ORF7a122X122del1Tga-ga22AY.290.000032
ORF7a122X122del1Tga-ga22AY.430.000009
ORF7a122X122del1tgAtg-22B.1.1770.000026
ORF7a122X122del1tgAtg-12B.1.617.20.000004
ORF7a122X122del1Tga-ga12B.1.617.20.000004
ORF7a122X122del1tgAtg-11AY.440.000006
ORF7a122X122del1Tga-ga11AY.460.000104
ORF7a122X122del1tgAtg-11AY.650.000533
ORF7a122X122del1Tga-ga11AY.880.000884
ORF7a122X122del1Tga-ga11B.1.1.2220.000204
ORF7a122X122del1tgAtg-11B.1.1.280.000311
ORF7a122X122del1tgAtg-11B.1.1.330.000421
ORF7a122X122del1tgAtg-11B.1.1.4160.000905
ORF7a122X122del1tgAtg-11B.1.6210.000089
ORF7a122X122del1tgAtg-11B.60.00091
ORF7a122X122del1tgAtg-11P.1.40.000977