CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = X122R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a122X122RnonsynTgaCga3903250.83333327757-27759
ORF7a122X122RnonsynTgaAga390620.15897427757-27759
ORF7a122X122RnonsynTgAAgG39010.002564127757-27759
ORF7a122X122RnonsynTgACgT39010.002564127757-27759
ORF7a122X122RnonsynTgACgC39010.002564127757-27759

Details of the mutation X122R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a122X122RTgaCga325390All0.000062
ORF7a122X122RTgaAga62390All0.000012
ORF7a122X122RTgACgT1390All0
ORF7a122X122RTgAAgG1390All0
ORF7a122X122RTgACgC1390All0
ORF7a122X122RTgaCga255259B.1.1.70.000228
ORF7a122X122RTgaAga4259B.1.1.70.000004
ORF7a122X122RTgaAga4141B.1.6161
ORF7a122X122RTgaAga79B.1.617.20.000026
ORF7a122X122RTgaCga29B.1.617.20.000008
ORF7a122X122RTgaCga78B.10.000064
ORF7a122X122RTgaAga18B.10.000009
ORF7a122X122RTgaCga67AY.200.000233
ORF7a122X122RTgaAga17AY.200.000039
ORF7a122X122RTgaCga66AY.440.000037
ORF7a122X122RTgaCga44B.1.4290.000094
ORF7a122X122RTgaCga33AY.290.000047
ORF7a122X122RTgaCga33AY.39.10.000119
ORF7a122X122RTgaCga33P.10.000047
ORF7a122X122RTgaCga33P.1.160.001122
ORF7a122X122RTgaCga22AY.1030.000012
ORF7a122X122RTgaCga22AY.40.000003
ORF7a122X122RTgaCga12AY.430.000004
ORF7a122X122RTgaAga12AY.430.000004
ORF7a122X122RTgaCga22AY.470.000062
ORF7a122X122RTgaCga12B.1.10.000018
ORF7a122X122RTgaAga12B.1.10.000018
ORF7a122X122RTgaAga12B.1.1600.000031
ORF7a122X122RTgaCga12B.1.1600.000031
ORF7a122X122RTgaCga22B.1.20.000018
ORF7a122X122RTgaCga22N.30.011628
ORF7a122X122RTgaAga11A.2.40.003367
ORF7a122X122RTgaCga11AY.1020.000027
ORF7a122X122RTgaCga11AY.1190.000035
ORF7a122X122RTgaCga11AY.140.000088
ORF7a122X122RTgaCga11AY.250.000006
ORF7a122X122RTgaCga11AY.260.000028
ORF7a122X122RTgACgT11AY.360.000148
ORF7a122X122RTgaCga11AY.840.000437
ORF7a122X122RTgaAga11AY.9.20.000037
ORF7a122X122RTgaCga11B.1.1.2790.001121
ORF7a122X122RTgaCga11B.1.1.2840.000107
ORF7a122X122RTgaCga11B.1.1.370.000193
ORF7a122X122RTgaCga11B.1.1.3860.066667
ORF7a122X122RTgaCga11B.1.1.5230.001563
ORF7a122X122RTgAAgG11B.1.177.630.002703
ORF7a122X122RTgaCga11B.1.2210.000071
ORF7a122X122RTgaCga11B.1.2430.00007
ORF7a122X122RTgaAga11B.1.2600.003344
ORF7a122X122RTgACgC11B.1.4160.001269
ORF7a122X122RTgaCga11B.1.4280.00102
ORF7a122X122RTgaCga11B.1.5260.000024
ORF7a122X122RTgaAga11B.1.5760.000907
ORF7a122X122RTgaCga11B.1.5960.000087
ORF7a122X122RTgaCga11B.1.6210.000089
ORF7a122X122RTgaCga11B.1.6370.000073
ORF7a122X122RTgaAga11C.360.000911
ORF7a122X122RTgaCga11C.37.10.002618
ORF7a122X122RTgaCga11W.40.001351