CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = V82A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a82V82AnonsyngTtgCt259635525962390.99995527637-27639
ORF7a82V82AnonsyngTTgCC2596355700.000026960927637-27639
ORF7a82V82AnonsyngTTgCG2596355310.000011939827637-27639
ORF7a82V82AnonsyngTTgCA2596355150.0000057773327637-27639

Details of the mutation V82A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a82V82AgTtgCt25962392596355All0.496561
ORF7a82V82AgTTgCC702596355All0.000013
ORF7a82V82AgTTgCG312596355All0.000006
ORF7a82V82AgTTgCA152596355All0.000003
ORF7a82V82AgTtgCt611892611908AY.40.952363
ORF7a82V82AgTTgCC12611908AY.40.000019
ORF7a82V82AgTTgCG3611908AY.40.000005
ORF7a82V82AgTTgCA1611908AY.40.000002
ORF7a82V82AgTtgCt256314256329B.1.617.20.965128
ORF7a82V82AgTTgCA7256329B.1.617.20.000026
ORF7a82V82AgTTgCG4256329B.1.617.20.000015
ORF7a82V82AgTTgCC4256329B.1.617.20.000015
ORF7a82V82AgTtgCt213858213869AY.430.94749
ORF7a82V82AgTTgCG8213869AY.430.000035
ORF7a82V82AgTTgCC2213869AY.430.000009
ORF7a82V82AgTTgCA1213869AY.430.000004
ORF7a82V82AgTtgCt157636157641AY.250.948152
ORF7a82V82AgTTgCC5157641AY.250.00003
ORF7a82V82AgTtgCt151829151831AY.440.924147
ORF7a82V82AgTTgCC2151831AY.440.000012
ORF7a82V82AgTtgCt151148151151AY.1030.938487
ORF7a82V82AgTTgCC3151151AY.1030.000019
ORF7a82V82AgTtgCt9460294609AY.30.940948
ORF7a82V82AgTTgCG794609AY.30.00007
ORF7a82V82AgTtgCt6316563166AY.290.996341
ORF7a82V82AgTTgCC163166AY.290.000016
ORF7a82V82AgTtgCt4519745197AY.4.20.980263
ORF7a82V82AgTtgCt4496344963AY.50.92845
ORF7a82V82AgTtgCt3739837398AY.1020.991569
ORF7a82V82AgTtgCt3312533125AY.260.937774
ORF7a82V82AgTtgCt3028530285AY.470.94202
ORF7a82V82AgTtgCt2651526518AY.1190.936198
ORF7a82V82AgTTgCC226518AY.1190.000071
ORF7a82V82AgTTgCG126518AY.1190.000035
ORF7a82V82AgTtgCt2602026022AY.9.20.955704
ORF7a82V82AgTTgCC126022AY.9.20.000037
ORF7a82V82AgTTgCG126022AY.9.20.000037
ORF7a82V82AgTtgCt2523325236AY.390.623545
ORF7a82V82AgTTgCC225236AY.390.000049
ORF7a82V82AgTTgCG125236AY.390.000025
ORF7a82V82AgTtgCt2452724527AY.39.10.971597
ORF7a82V82AgTtgCt2433624338AY.200.945822
ORF7a82V82AgTTgCG124338AY.200.000039
ORF7a82V82AgTTgCA124338AY.200.000039
ORF7a82V82AgTtgCt2351623516AY.60.967179
ORF7a82V82AgTtgCt2330623308AY.1200.866491
ORF7a82V82AgTTgCC223308AY.1200.000074
ORF7a82V82AgTtgCt2301223012AY.420.925775
ORF7a82V82AgTtgCt1959819599AY.98.10.949148
ORF7a82V82AgTTgCC119599AY.98.10.000048
ORF7a82V82AgTtgCt1883118832AY.1000.866351
ORF7a82V82AgTTgCC118832AY.1000.000046
ORF7a82V82AgTtgCt1626016276AY.750.910924
ORF7a82V82AgTTgCC1616276AY.750.000896
ORF7a82V82AgTtgCt1512215122AY.1180.947375
ORF7a82V82AgTtgCt1451214512AY.270.939227
ORF7a82V82AgTtgCt1404414044AY.90.949304
ORF7a82V82AgTtgCt1369313697AY.330.914391
ORF7a82V82AgTTgCC213697AY.330.000134
ORF7a82V82AgTTgCA113697AY.330.000067
ORF7a82V82AgTTgCG113697AY.330.000067
ORF7a82V82AgTtgCt1314013140AY.46.60.948805
ORF7a82V82AgTtgCt1247212472AY.230.869917
ORF7a82V82AgTtgCt1183111831AY.980.934592
ORF7a82V82AgTtgCt1155411554AY.9.10.967348
ORF7a82V82AgTtgCt1108111081AY.1170.936528
ORF7a82V82AgTtgCt1091310913AY.140.960482
ORF7a82V82AgTtgCt1073810738AY.3.10.915509
ORF7a82V82AgTtgCt1021410214AY.99.20.941296
ORF7a82V82AgTtgCt99389938AY.340.963638
ORF7a82V82AgTtgCt97729772AY.540.931732
ORF7a82V82AgTtgCt91479147AY.610.958403
ORF7a82V82AgTtgCt89758977AY.460.934117
ORF7a82V82AgTTgCG18977AY.460.000104
ORF7a82V82AgTTgCC18977AY.460.000104
ORF7a82V82AgTtgCt86408640AY.1100.973631
ORF7a82V82AgTtgCt85878587AY.4.50.923036
ORF7a82V82AgTtgCt85188518AY.740.985082
ORF7a82V82AgTtgCt82658265AY.7.10.931478
ORF7a82V82AgTtgCt75037503AY.450.912996
ORF7a82V82AgTtgCt67786778B.1.617.10.874129
ORF7a82V82AgTtgCt65946594AY.1130.938915
ORF7a82V82AgTtgCt63056312AY.360.934489
ORF7a82V82AgTTgCC76312AY.360.001037
ORF7a82V82AgTtgCt61446148AY.1210.831394
ORF7a82V82AgTTgCA46148AY.1210.000541
ORF7a82V82AgTtgCt60676067AY.4.2.10.903903
ORF7a82V82AgTtgCt58955895AY.130.94897
ORF7a82V82AgTtgCt58135813AY.46.40.956243
ORF7a82V82AgTtgCt53365336AY.690.99608
ORF7a82V82AgTtgCt52295229AY.1110.957692
ORF7a82V82AgTtgCt48994899AY.46.50.972024
ORF7a82V82AgTtgCt48314831AY.70.946884
ORF7a82V82AgTtgCt46454645AY.700.968515
ORF7a82V82AgTtgCt46144614AY.75.10.831951
ORF7a82V82AgTtgCt45204520AY.29.10.996692
ORF7a82V82AgTtgCt41464146AY.350.966208
ORF7a82V82AgTtgCt40154016AY.1140.927895
ORF7a82V82AgTTgCC14016AY.1140.000231
ORF7a82V82AgTtgCt36003600AY.930.983069
ORF7a82V82AgTtgCt33863386AY.5.40.936912
ORF7a82V82AgTtgCt32913291AY.410.967372
ORF7a82V82AgTtgCt32583258AY.530.936745
ORF7a82V82AgTtgCt32333233AY.1160.927158
ORF7a82V82AgTtgCt30173017AY.116.10.939583
ORF7a82V82AgTtgCt29692969AY.680.812757
ORF7a82V82AgTtgCt29572957AY.920.849469
ORF7a82V82AgTtgCt28792879AY.370.909924
ORF7a82V82AgTtgCt28682868AY.120.10.920706
ORF7a82V82AgTtgCt27982798AY.5.30.943995
ORF7a82V82AgTtgCt27892791AY.1060.934025
ORF7a82V82AgTTgCG22791AY.1060.00067
ORF7a82V82AgTtgCt26712671AY.20.951211
ORF7a82V82AgTtgCt25292529AY.630.978337
ORF7a82V82AgTtgCt24882488AY.120.786346
ORF7a82V82AgTtgCt24222422AY.10.958449
ORF7a82V82AgTtgCt23882388AY.23.10.996661
ORF7a82V82AgTtgCt23832383AY.300.943015
ORF7a82V82AgTtgCt23642364AY.4.40.967267
ORF7a82V82AgTtgCt23502351AY.160.892179
ORF7a82V82AgTTgCC12351AY.160.00038
ORF7a82V82AgTtgCt22022202AY.620.959477
ORF7a82V82AgTtgCt21882188AY.240.943103
ORF7a82V82AgTtgCt21492149AY.940.951306
ORF7a82V82AgTtgCt21432143AY.850.915421
ORF7a82V82AgTtgCt19711971AY.1070.918453
ORF7a82V82AgTtgCt19221922AY.120.2.10.957648
ORF7a82V82AgTtgCt19171917AY.34.10.977562
ORF7a82V82AgTtgCt18761876AY.1010.920059
ORF7a82V82AgTtgCt18731873AY.380.935097
ORF7a82V82AgTtgCt18571857AY.670.862117
ORF7a82V82AgTtgCt18461846AY.840.807524
ORF7a82V82AgTtgCt18161816AY.710.862708
ORF7a82V82AgTtgCt17931793AY.100.950185
ORF7a82V82AgTtgCt17441744AY.480.811163
ORF7a82V82AgTtgCt17411741AY.320.92705
ORF7a82V82AgTtgCt17261726AY.590.914195
ORF7a82V82AgTtgCt16201620AY.80.981818
ORF7a82V82AgTtgCt16041604AY.7.20.897092
ORF7a82V82AgTtgCt15551556AY.640.925595
ORF7a82V82AgTTgCG11556AY.640.000595
ORF7a82V82AgTtgCt15041504AY.46.20.955527
ORF7a82V82AgTtgCt15001502AY.570.984252
ORF7a82V82AgTTgCC21502AY.570.001312
ORF7a82V82AgTtgCt14741474AY.730.980705
ORF7a82V82AgTtgCt14521452AY.1050.933762
ORF7a82V82AgTtgCt14441444AY.650.769723
ORF7a82V82AgTtgCt14241424AY.900.974675
ORF7a82V82AgTtgCt13441344AY.4.10.99115
ORF7a82V82AgTtgCt13191319AY.39.1.10.955797
ORF7a82V82AgTtgCt12761276AY.910.932067
ORF7a82V82AgTtgCt12251225AY.500.979217
ORF7a82V82AgTtgCt11761176AY.860.975934
ORF7a82V82AgTtgCt11551155AY.4.30.972222
ORF7a82V82AgTtgCt11221122AY.870.934221
ORF7a82V82AgTtgCt10981098AY.950.835616
ORF7a82V82AgTtgCt10851085AY.1090.802515
ORF7a82V82AgTtgCt10171017AY.46.30.94958
ORF7a82V82AgTtgCt10101010AY.600.947467
ORF7a82V82AgTtgCt10051005AY.510.913636
ORF7a82V82AgTtgCt993993AY.580.901089
ORF7a82V82AgTtgCt922922AY.550.845872
ORF7a82V82AgTtgCt912912AY.16.10.428571
ORF7a82V82AgTtgCt910910AY.880.804598
ORF7a82V82AgTtgCt871871AY.1080.960309
ORF7a82V82AgTtgCt859859AY.400.828351
ORF7a82V82AgTtgCt835835AY.520.679967
ORF7a82V82AgTtgCt825825AY.990.865687
ORF7a82V82AgTtgCt808808AY.790.978208
ORF7a82V82AgTtgCt792792AY.770.892897
ORF7a82V82AgTtgCt788788AY.46.10.809035
ORF7a82V82AgTtgCt770770AY.660.823529
ORF7a82V82AgTtgCt731731AY.110.978581
ORF7a82V82AgTtgCt716716AY.720.97415
ORF7a82V82AgTtgCt708708AY.120.20.910026
ORF7a82V82AgTtgCt692692AY.190.789054
ORF7a82V82AgTtgCt628628AY.780.967643
ORF7a82V82AgTtgCt623623AY.99.10.967391
ORF7a82V82AgTtgCt617617AY.39.20.950693
ORF7a82V82AgTtgCt616616AY.820.835821
ORF7a82V82AgTtgCt570570AY.560.914928
ORF7a82V82AgTtgCt557557AY.970.947279
ORF7a82V82AgTtgCt529529AY.281
ORF7a82V82AgTtgCt505505AY.9.2.10.998024
ORF7a82V82AgTtgCt503503AY.210.954459
ORF7a82V82AgTtgCt500500B.10.00458
ORF7a82V82AgTtgCt464464AY.220.970711
ORF7a82V82AgTtgCt463463AY.800.522573
ORF7a82V82AgTtgCt458458AY.810.912351
ORF7a82V82AgTtgCt457457AY.830.787931
ORF7a82V82AgTtgCt446446AY.150.991111
ORF7a82V82AgTtgCt435435AY.1040.863095
ORF7a82V82AgTtgCt382382AY.5.20.940887
ORF7a82V82AgTtgCt295295B.1.617.30.880597
ORF7a82V82AgTtgCt271271AY.960.562241
ORF7a82V82AgTtgCt254254AY.5.10.954887
ORF7a82V82AgTtgCt234234AY.91.10.95122
ORF7a82V82AgTtgCt207207AY.490.661342
ORF7a82V82AgTtgCt202202AY.760.975845
ORF7a82V82AgTtgCt196196AY.890.960784
ORF7a82V82AgTtgCt122122AY.1150.635417
ORF7a82V82AgTtgCt120121B.1.1.70.000107
ORF7a82V82AgTTgCC1121B.1.1.70.000001
ORF7a82V82AgTtgCt9999AY.181
ORF7a82V82AgTtgCt8383AY.170.680328
ORF7a82V82AgTtgCt5252AY.310.962963
ORF7a82V82AgTtgCt4949B.1.2140.179487
ORF7a82V82AgTtgCt3939B.1.10.000707
ORF7a82V82AgTtgCt2727B0.003451
ORF7a82V82AgTtgCt2020B.1.3510.000595
ORF7a82V82AgTtgCt1212B.1.1770.000158
ORF7a82V82AgTtgCt1212P.10.000189
ORF7a82V82AgTtgCt1111B.1.6210.000974
ORF7a82V82AgTtgCt1010B.1.619.10.006414
ORF7a82V82AgTtgCt99B.1.177.730.005096
ORF7a82V82AgTtgCt99B.1.5960.000784
ORF7a82V82AgTtgCt88B.1.20.00007
ORF7a82V82AgTtgCt77B.1.1600.000218
ORF7a82V82AgTtgCt77B.1.6280.002467
ORF7a82V82AgTtgCt66B.1.5760.00544
ORF7a82V82AgTtgCt55B.1.1.3170.002058
ORF7a82V82AgTtgCt55B.1.6230.002682
ORF7a82V82AgTtgCt44A.2.50.001996
ORF7a82V82AgTtgCt44B.1.1.4320.005063
ORF7a82V82AgTtgCt44B.1.3750.003279
ORF7a82V82AgTtgCt44B.1.6370.000292
ORF7a82V82AgTtgCt44C.370.000464
ORF7a82V82AgTtgCt44P.1.170.000647
ORF7a82V82AgTtgCt33A0.001161
ORF7a82V82AgTtgCt33AZ.20.002463
ORF7a82V82AgTtgCt33B.1.4290.000071
ORF7a82V82AgTtgCt33B.1.621.10.001517
ORF7a82V82AgTtgCt22AU.30.004219
ORF7a82V82AgTtgCt22B.1.1.3180.000604
ORF7a82V82AgTtgCt22B.1.1.3260.003521
ORF7a82V82AgTTgCC12B.1.1.3770.001381
ORF7a82V82AgTtgCt12B.1.1.3770.001381
ORF7a82V82AgTtgCt22B.1.1.5230.003125
ORF7a82V82AgTtgCt22B.1.1570.00597
ORF7a82V82AgTtgCt22B.1.1700.008621
ORF7a82V82AgTtgCt22B.1.2430.000139
ORF7a82V82AgTtgCt22B.1.2470.029851
ORF7a82V82AgTtgCt22B.1.258.110.000793
ORF7a82V82AgTtgCt22B.1.416.10.003125
ORF7a82V82AgTtgCt22B.1.4270.000101
ORF7a82V82AgTtgCt22B.1.466.20.000782
ORF7a82V82AgTtgCt22B.1.5950.000522
ORF7a82V82AgTtgCt22B.1.6040.034483
ORF7a82V82AgTtgCt22B.1.6190.001742
ORF7a82V82AgTtgCt22P.1.120.000968
ORF7a82V82AgTtgCt22P.1.70.000639
ORF7a82V82AgTtgCt110.055556
ORF7a82V82AgTtgCt11A.2.5.20.001572
ORF7a82V82AgTtgCt11B.1.1.1210.002427
ORF7a82V82AgTtgCt11B.1.1.280.000311
ORF7a82V82AgTtgCt11B.1.1.3060.000438
ORF7a82V82AgTtgCt11B.1.1.3480.000796
ORF7a82V82AgTtgCt11B.1.1.5190.00004
ORF7a82V82AgTtgCt11B.1.1.5260.003546
ORF7a82V82AgTtgCt11B.1.1310.008772
ORF7a82V82AgTtgCt11B.1.1420.002899
ORF7a82V82AgTtgCt11B.1.160.150.00495
ORF7a82V82AgTtgCt11B.1.177.70.000165
ORF7a82V82AgTtgCt11B.1.2180.005155
ORF7a82V82AgTtgCt11B.1.2210.000071
ORF7a82V82AgTtgCt11B.1.243.20.014493
ORF7a82V82AgTtgCt11B.1.2580.000067
ORF7a82V82AgTtgCt11B.1.3010.005917
ORF7a82V82AgTtgCt11B.1.3490.000715
ORF7a82V82AgTtgCt11B.1.360.000146
ORF7a82V82AgTtgCt11B.1.36.310.001751
ORF7a82V82AgTtgCt11B.1.3620.001541
ORF7a82V82AgTtgCt11B.1.4000.000429
ORF7a82V82AgTtgCt11B.1.4330.003195
ORF7a82V82AgTtgCt11B.1.438.10.000107
ORF7a82V82AgTtgCt11B.1.4590.004082
ORF7a82V82AgTtgCt11B.1.4740.001901
ORF7a82V82AgTtgCt11B.1.5240.001406
ORF7a82V82AgTtgCt11B.1.5250.000113
ORF7a82V82AgTtgCt11B.1.5260.000024
ORF7a82V82AgTtgCt11B.1.5640.000426
ORF7a82V82AgTtgCt11B.1.5740.002151
ORF7a82V82AgTtgCt11B.1.5820.000491
ORF7a82V82AgTtgCt11B.1.6090.000479
ORF7a82V82AgTtgCt11B.1.830.015385
ORF7a82V82AgTtgCt11B.550.00295
ORF7a82V82AgTtgCt11C.36.30.000567
ORF7a82V82AgTtgCt11C.37.10.002618
ORF7a82V82AgTtgCt11P.1.10.000318
ORF7a82V82AgTtgCt11P.1.80.004785
ORF7a82V82AgTtgCt11P.30.001595
ORF7a82V82AgTtgCt11P.50.013699
ORF7a82V82AgTtgCt11Q.10.000126
ORF7a82V82AgTtgCt11Q.30.000145