CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = V71L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a71V71LnonsynGtaTta144114120.97987527604-27606
ORF7a71V71LnonsynGtaCta1441260.01804327604-27606
ORF7a71V71LnonsynGtATtG144110.00069396327604-27606
ORF7a71V71LnonsynGtACtG144110.00069396327604-27606
ORF7a71V71LnonsynGtACtT144110.00069396327604-27606

Details of the mutation V71L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a71V71LGtaTta14121441All0.00027
ORF7a71V71LGtaCta261441All0.000005
ORF7a71V71LGtACtG11441All0
ORF7a71V71LGtACtT11441All0
ORF7a71V71LGtATtG11441All0
ORF7a71V71LGtaTta211211AY.1200.007845
ORF7a71V71LGtaTta197205B.1.1.70.000176
ORF7a71V71LGtaCta8205B.1.1.70.000007
ORF7a71V71LGtaTta190190AY.260.005379
ORF7a71V71LGtaTta161161A.290.856383
ORF7a71V71LGtaTta7373B.1.1.5190.002899
ORF7a71V71LGtaTta6164AY.40.000095
ORF7a71V71LGtaCta364AY.40.000005
ORF7a71V71LGtaTta5658B.1.617.20.000211
ORF7a71V71LGtaCta158B.1.617.20.000004
ORF7a71V71LGtACtG158B.1.617.20.000004
ORF7a71V71LGtaTta4646P.10.000725
ORF7a71V71LGtaTta4142AY.250.000247
ORF7a71V71LGtaCta142AY.250.000006
ORF7a71V71LGtaTta3030AY.46.60.002166
ORF7a71V71LGtaTta2525B.1.1600.00078
ORF7a71V71LGtaTta2424B.1.1.700.008186
ORF7a71V71LGtaTta2323AY.430.000102
ORF7a71V71LGtaTta1821AY.440.00011
ORF7a71V71LGtaCta221AY.440.000012
ORF7a71V71LGtATtG121AY.440.000006
ORF7a71V71LGtaTta1618AY.1030.000099
ORF7a71V71LGtaCta218AY.1030.000012
ORF7a71V71LGtaTta1818B.1.1.1760.007909
ORF7a71V71LGtaTta1616B.1.6280.005638
ORF7a71V71LGtaTta1414B.10.000128
ORF7a71V71LGtaTta1313B.1.5750.003944
ORF7a71V71LGtaTta1313B.1.6380.684211
ORF7a71V71LGtaTta88B.1.1770.000105
ORF7a71V71LGtaTta77B.1.1.2140.000388
ORF7a71V71LGtaTta67B.1.20.000053
ORF7a71V71LGtaCta17B.1.20.000009
ORF7a71V71LGtaTta66AY.30.00006
ORF7a71V71LGtaTta66AY.99.20.000553
ORF7a71V71LGtaTta55B.1.177.530.011962
ORF7a71V71LGtaTta55C.160.005302
ORF7a71V71LGtaTta34AY.1020.00008
ORF7a71V71LGtaCta14AY.1020.000027
ORF7a71V71LGtaTta44AY.330.000267
ORF7a71V71LGtaTta44B.1.1.2220.000816
ORF7a71V71LGtaTta44B.1.1180.026846
ORF7a71V71LGtaTta33A0.001161
ORF7a71V71LGtaTta33AY.1190.000106
ORF7a71V71LGtaCta23AY.290.000032
ORF7a71V71LGtaTta13AY.290.000016
ORF7a71V71LGtaTta33AY.470.000093
ORF7a71V71LGtaTta33AY.680.000821
ORF7a71V71LGtaTta33B0.000383
ORF7a71V71LGtaTta33B.1.10.000054
ORF7a71V71LGtaTta33B.1.1.500.002037
ORF7a71V71LGtaTta33B.1.36.380.004926
ORF7a71V71LGtaTta33P.1.100.000808
ORF7a71V71LGtaTta33P.1.140.000143
ORF7a71V71LGtACtT120.055556
ORF7a71V71LGtaCta120.055556
ORF7a71V71LGtaTta22AY.1130.000285
ORF7a71V71LGtaTta22AY.1170.000169
ORF7a71V71LGtaTta22AY.120.10.000642
ORF7a71V71LGtaTta22AY.200.000078
ORF7a71V71LGtaTta22AY.360.000296
ORF7a71V71LGtaTta22AY.39.10.000079
ORF7a71V71LGtaTta22AY.4.20.000043
ORF7a71V71LGtaTta22AY.460.000208
ORF7a71V71LGtaTta22AY.50.000041
ORF7a71V71LGtaTta22AY.7.10.000225
ORF7a71V71LGtaTta22AY.750.000112
ORF7a71V71LGtaTta22AY.98.10.000097
ORF7a71V71LGtaTta22B.1.1.2770.001517
ORF7a71V71LGtaTta22B.1.1.3110.000716
ORF7a71V71LGtaTta22B.1.258.120.015748
ORF7a71V71LGtaTta22B.1.3510.000059
ORF7a71V71LGtaTta22B.1.36.290.001035
ORF7a71V71LGtaTta22B.1.4220.001625
ORF7a71V71LGtaTta22B.1.4270.000101
ORF7a71V71LGtaTta12B.1.4290.000024
ORF7a71V71LGtaCta12B.1.4290.000024
ORF7a71V71LGtaTta22B.1.5960.000174
ORF7a71V71LGtaTta22C.370.000232
ORF7a71V71LGtaTta11AY.1060.000335
ORF7a71V71LGtaTta11AY.1210.000135
ORF7a71V71LGtaTta11AY.130.000161
ORF7a71V71LGtaCta11AY.160.00038
ORF7a71V71LGtaTta11AY.210.001898
ORF7a71V71LGtaTta11AY.240.000431
ORF7a71V71LGtaTta11AY.3.10.000085
ORF7a71V71LGtaTta11AY.390.000025
ORF7a71V71LGtaCta11AY.450.000122
ORF7a71V71LGtaTta11AY.46.50.000198
ORF7a71V71LGtaTta11AY.60.000041
ORF7a71V71LGtaTta11AY.610.000105
ORF7a71V71LGtaTta11AY.670.000464
ORF7a71V71LGtaTta11AY.70.000196
ORF7a71V71LGtaTta11AY.890.004902
ORF7a71V71LGtaTta11AY.9.20.000037
ORF7a71V71LGtaTta11AY.990.001049
ORF7a71V71LGtaTta11AZ.50.003509
ORF7a71V71LGtaTta11B.1.1.2160.00089
ORF7a71V71LGtaTta11B.1.1.3180.000302
ORF7a71V71LGtaTta11B.1.1.330.000421
ORF7a71V71LGtaTta11B.1.177.210.000076
ORF7a71V71LGtaTta11B.1.177.330.001645
ORF7a71V71LGtaTta11B.1.177.440.000519
ORF7a71V71LGtaTta11B.1.3190.003049
ORF7a71V71LGtaTta11B.1.360.000146
ORF7a71V71LGtaTta11B.1.36.180.00042
ORF7a71V71LGtaCta11B.1.3990.001934
ORF7a71V71LGtaTta11B.1.4090.000781
ORF7a71V71LGtaTta11B.1.466.20.000391
ORF7a71V71LGtaTta11B.1.5640.000426
ORF7a71V71LGtaTta11B.1.5740.002151
ORF7a71V71LGtaTta11B.1.617.10.000129
ORF7a71V71LGtaTta11B.1.621.10.000506
ORF7a71V71LGtaTta11B.550.00295
ORF7a71V71LGtaTta11D.20.000075
ORF7a71V71LGtaTta11P.1.150.000232