CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = V29del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a29V29del2delgTAg--22180.81818227478-27480
ORF7a29V29del2delGTa--a2240.18181827478-27480

Details of the mutation V29del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a29V29del2gTAg--1822All0.000003
ORF7a29V29del2GTa--a422All0.000001
ORF7a29V29del2gTAg--77AY.290.00011
ORF7a29V29del2GTa--a24AY.250.000012
ORF7a29V29del2gTAg--24AY.250.000012
ORF7a29V29del2gTAg--22AY.390.000049
ORF7a29V29del2gTAg--12AY.40.000002
ORF7a29V29del2GTa--a12AY.40.000002
ORF7a29V29del2gTAg--11AY.1190.000035
ORF7a29V29del2gTAg--11AY.200.000039
ORF7a29V29del2GTa--a11AY.450.000122
ORF7a29V29del2gTAg--11AY.60.000041
ORF7a29V29del2gTAg--11AY.760.004831
ORF7a29V29del2gTAg--11B.1.36.290.000517
ORF7a29V29del2gTAg--11B.1.617.20.000004