CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = V29del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a29V29del1delgtAgt-57450.78947427478-27480
ORF7a29V29del1delGta-ta57120.21052627478-27480

Details of the mutation V29del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a29V29del1gtAgt-4557All0.000009
ORF7a29V29del1Gta-ta1257All0.000002
ORF7a29V29del1Gta-ta1013B.1.1.70.000009
ORF7a29V29del1gtAgt-313B.1.1.70.000003
ORF7a29V29del1gtAgt-1212AY.1030.000075
ORF7a29V29del1gtAgt-1111AY.290.000174
ORF7a29V29del1gtAgt-34AY.250.000018
ORF7a29V29del1Gta-ta14AY.250.000006
ORF7a29V29del1gtAgt-44AY.40.000006
ORF7a29V29del1gtAgt-33AY.1180.000188
ORF7a29V29del1gtAgt-23B.1.617.20.000008
ORF7a29V29del1Gta-ta13B.1.617.20.000004
ORF7a29V29del1gtAgt-22AY.30.00002
ORF7a29V29del1gtAgt-22B.1.1.5190.000079
ORF7a29V29del1gtAgt-11AY.1130.000142
ORF7a29V29del1gtAgt-11AY.9.10.000084
ORF7a29V29del1gtAgt-11B.1.4290.000024