CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = V104del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a104V104del1delGtt-tt158615810.99684727703-27705
ORF7a104V104del1delgtTgt-158640.0025220727703-27705
ORF7a104V104del1delGtT-tG158610.00063051727703-27705

Details of the mutation V104del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a104V104del1Gtt-tt15811586All0.000302
ORF7a104V104del1gtTgt-41586All0.000001
ORF7a104V104del1GtT-tG11586All0
ORF7a104V104del1Gtt-tt10321032AY.39.1.10.747826
ORF7a104V104del1Gtt-tt238238AY.39.10.009428
ORF7a104V104del1Gtt-tt5555AY.50.001136
ORF7a104V104del1Gtt-tt3434AY.700.007089
ORF7a104V104del1Gtt-tt2829B.1.617.20.000105
ORF7a104V104del1gtTgt-129B.1.617.20.000004
ORF7a104V104del1Gtt-tt2727AY.1180.001692
ORF7a104V104del1Gtt-tt2222AY.40.000034
ORF7a104V104del1Gtt-tt1919AY.1030.000118
ORF7a104V104del1Gtt-tt1617B.1.1.70.000014
ORF7a104V104del1gtTgt-117B.1.1.70.000001
ORF7a104V104del1Gtt-tt1516AY.250.00009
ORF7a104V104del1gtTgt-116AY.250.000006
ORF7a104V104del1Gtt-tt1010AY.470.000311
ORF7a104V104del1Gtt-tt88AY.3.10.000682
ORF7a104V104del1Gtt-tt66AY.440.000037
ORF7a104V104del1Gtt-tt55AY.1020.000133
ORF7a104V104del1Gtt-tt55AY.340.000485
ORF7a104V104del1Gtt-tt44AY.350.000932
ORF7a104V104del1Gtt-tt44AY.430.000018
ORF7a104V104del1Gtt-tt44AY.99.20.000369
ORF7a104V104del1Gtt-tt33AY.1200.000112
ORF7a104V104del1Gtt-tt33AY.260.000085
ORF7a104V104del1Gtt-tt33AY.290.000047
ORF7a104V104del1Gtt-tt33AY.570.001969
ORF7a104V104del1Gtt-tt33B.1.20.000026
ORF7a104V104del1Gtt-tt22AY.300.000791
ORF7a104V104del1Gtt-tt22AY.390.000049
ORF7a104V104del1Gtt-tt22AY.540.000191
ORF7a104V104del1Gtt-tt22AY.60.000082
ORF7a104V104del1Gtt-tt22AY.90.000135
ORF7a104V104del1Gtt-tt11AY.1070.000466
ORF7a104V104del1Gtt-tt11AY.1130.000142
ORF7a104V104del1Gtt-tt11AY.1140.000231
ORF7a104V104del1Gtt-tt11AY.1190.000035
ORF7a104V104del1Gtt-tt11AY.1210.000135
ORF7a104V104del1Gtt-tt11AY.30.00001
ORF7a104V104del1Gtt-tt11AY.410.000294
ORF7a104V104del1Gtt-tt11AY.420.00004
ORF7a104V104del1Gtt-tt11AY.650.000533
ORF7a104V104del1Gtt-tt11AY.7.10.000113
ORF7a104V104del1Gtt-tt11AY.7.20.000559
ORF7a104V104del1Gtt-tt11B.10.000009
ORF7a104V104del1Gtt-tt11B.1.1.1940.00495
ORF7a104V104del1Gtt-tt11B.1.1.4860.001577
ORF7a104V104del1Gtt-tt11B.1.1.5190.00004
ORF7a104V104del1Gtt-tt11B.1.1770.000013
ORF7a104V104del1Gtt-tt11B.1.177.690.001484
ORF7a104V104del1gtTgt-11B.1.2210.000071
ORF7a104V104del1Gtt-tt11B.1.5260.000024
ORF7a104V104del1Gtt-tt11B.1.5750.000303
ORF7a104V104del1Gtt-tt11B.1.6210.000089
ORF7a104V104del1Gtt-tt11B.1.621.10.000506
ORF7a104V104del1Gtt-tt11B.1.6370.000073
ORF7a104V104del1Gtt-tt11P.10.000016
ORF7a104V104del1GtT-tG11P.1.140.000048
ORF7a104V104del1Gtt-tt11W.40.001351