CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = T61del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a61T61deldelACT---3573535735127574-27576

Details of the mutation T61del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a61T61delACT---3573535735All0.006835
ORF7a61T61delACT---1299612996AY.40.020227
ORF7a61T61delACT---46594659B.1.1.70.004171
ORF7a61T61delACT---35723572B.1.617.20.01345
ORF7a61T61delACT---16541654AY.120.10.530979
ORF7a61T61delACT---16141614AY.250.009708
ORF7a61T61delACT---10581058AY.430.004687
ORF7a61T61delACT---921921AY.1030.005719
ORF7a61T61delACT---722722AY.440.004395
ORF7a61T61delACT---556556AY.30.00553
ORF7a61T61delACT---462462AY.260.013079
ORF7a61T61delACT---416416AY.390.01028
ORF7a61T61delACT---350350AY.1020.00928
ORF7a61T61delACT---295295AY.4.20.006398
ORF7a61T61delACT---280280AY.46.50.055556
ORF7a61T61delACT---261261AY.1200.009704
ORF7a61T61delACT---234234AY.290.003691
ORF7a61T61delACT---223223B.1.3510.006629
ORF7a61T61delACT---190190B.1.5260.004466
ORF7a61T61delACT---184184B.1.177.210.014071
ORF7a61T61delACT---177177AY.980.013982
ORF7a61T61delACT---165165AY.50.003407
ORF7a61T61delACT---153153B.1.1770.002015
ORF7a61T61delACT---149149B.1.20.001312
ORF7a61T61delACT---143143B.10.00131
ORF7a61T61delACT---140140AY.1190.004943
ORF7a61T61delACT---134134AY.470.004168
ORF7a61T61delACT---134134AY.540.012777
ORF7a61T61delACT---133133AY.1000.006119
ORF7a61T61delACT---118118AY.60.004853
ORF7a61T61delACT---118118AY.7.10.013299
ORF7a61T61delACT---9292AY.46.40.015134
ORF7a61T61delACT---8888AY.330.005876
ORF7a61T61delACT---8787AY.750.004874
ORF7a61T61delACT---8080AY.5.40.022136
ORF7a61T61delACT---7777AY.46.60.00556
ORF7a61T61delACT---7575P.10.001182
ORF7a61T61delACT---7272AY.3.10.006139
ORF7a61T61delACT---7272B.1.6210.006373
ORF7a61T61delACT---6464AY.200.002487
ORF7a61T61delACT---6161AY.450.007423
ORF7a61T61delACT---6060AY.1130.008543
ORF7a61T61delACT---5959AY.420.002374
ORF7a61T61delACT---5858AY.39.10.002298
ORF7a61T61delACT---5858AY.460.006037
ORF7a61T61delACT---5555B.1.2180.283505
ORF7a61T61delACT---5454AY.230.003766
ORF7a61T61delACT---5353AY.9.20.001947
ORF7a61T61delACT---5252B.1.177.40.010975
ORF7a61T61delACT---5151AY.1180.003195
ORF7a61T61delACT---5050AY.116.10.015571
ORF7a61T61delACT---4949AY.98.10.002373
ORF7a61T61delACT---4747AY.130.007566
ORF7a61T61delACT---4747B.1.1.2840.005048
ORF7a61T61delACT---4747B.1.4290.001106
ORF7a61T61delACT---4646AY.90.003109
ORF7a61T61delACT---4545AY.910.032871
ORF7a61T61delACT---4444AY.1070.020503
ORF7a61T61delACT---4444B.1.10.000798
ORF7a61T61delACT---4343AY.1170.003634
ORF7a61T61delACT---4343B.1.1600.001341
ORF7a61T61delACT---4343P.1.140.002055
ORF7a61T61delACT---4242AY.70.008232
ORF7a61T61delACT---4141AY.99.20.003778
ORF7a61T61delACT---4040AY.1100.004508
ORF7a61T61delACT---4040AY.4.2.10.005959
ORF7a61T61delACT---3838AY.340.003685
ORF7a61T61delACT---3232B.1.1.2140.001775
ORF7a61T61delACT---2929AY.1210.003924
ORF7a61T61delACT---2929AY.610.003039
ORF7a61T61delACT---2929AY.7.20.016219
ORF7a61T61delACT---2828AY.1110.005128
ORF7a61T61delACT---2828AY.46.20.017789
ORF7a61T61delACT---2828AY.600.026266
ORF7a61T61delACT---2727AY.520.021987
ORF7a61T61delACT---2727AY.9.10.002261
ORF7a61T61delACT---2727B.1.6370.001973
ORF7a61T61delACT---2626AY.190.029647
ORF7a61T61delACT---2525B.1.5960.002178
ORF7a61T61delACT---2424AY.360.003557
ORF7a61T61delACT---2222AY.1060.007368
ORF7a61T61delACT---2222C.370.002553
ORF7a61T61delACT---2121AY.300.00831
ORF7a61T61delACT---2121AY.370.006637
ORF7a61T61delACT---2020AY.740.002313
ORF7a61T61delACT---2020B.1.1.2220.00408
ORF7a61T61delACT---2020B.1.214.20.01199
ORF7a61T61delACT---2020B.1.4270.00101
ORF7a61T61delACT---2020R.10.0018
ORF7a61T61delACT---1919AY.1160.005449
ORF7a61T61delACT---1919B.1.1.5190.000755
ORF7a61T61delACT---1919Q.80.003133
ORF7a61T61delACT---1818AY.140.001584
ORF7a61T61delACT---1717AY.4.50.001827
ORF7a61T61delACT---1616AY.10.006332
ORF7a61T61delACT---1616AY.620.006972
ORF7a61T61delACT---1616B.1.2430.001113
ORF7a61T61delACT---1414AY.1140.003235
ORF7a61T61delACT---1414AY.840.006124
ORF7a61T61delACT---1414B.1.1.2580.045603
ORF7a61T61delACT---1414D.20.001051
ORF7a61T61delACT---1313AY.680.003559
ORF7a61T61delACT---1313B.1.5250.001471
ORF7a61T61delACT---1212AY.120.003793
ORF7a61T61delACT---1212AY.900.008214
ORF7a61T61delACT---1212B.1.3240.019262
ORF7a61T61delACT---1111AY.350.002564
ORF7a61T61delACT---1111AY.870.009159
ORF7a61T61delACT---1111AY.990.011542
ORF7a61T61delACT---1111B.1.177.600.002403
ORF7a61T61delACT---1010B.1.177.560.006676
ORF7a61T61delACT---1010B.1.3910.011274
ORF7a61T61delACT---1010B.1.6280.003524
ORF7a61T61delACT---99AY.1090.006657
ORF7a61T61delACT---99B.1.258.90.045
ORF7a61T61delACT---99L.10.017143
ORF7a61T61delACT---88A.210.022161
ORF7a61T61delACT---88AY.100.00424
ORF7a61T61delACT---88AY.160.003037
ORF7a61T61delACT---88AY.270.000518
ORF7a61T61delACT---88AY.590.004237
ORF7a61T61delACT---88AY.710.0038
ORF7a61T61delACT---88AY.850.003417
ORF7a61T61delACT---88B.1.1.2310.024768
ORF7a61T61delACT---88Q.10.001011
ORF7a61T61delACT---88Q.20.004908
ORF7a61T61delACT---77AY.320.003727
ORF7a61T61delACT---77AY.4.40.002864
ORF7a61T61delACT---77AY.650.003731
ORF7a61T61delACT---77AY.75.10.001262
ORF7a61T61delACT---77AY.920.002011
ORF7a61T61delACT---77B.1.1.30.06087
ORF7a61T61delACT---77B.1.1.330.002946
ORF7a61T61delACT---77P.1.150.001626
ORF7a61T61delACT---77P.1.20.008092
ORF7a61T61delACT---77P.20.001306
ORF7a61T61delACT---66AY.1080.006615
ORF7a61T61delACT---66AY.29.10.001323
ORF7a61T61delACT---66AY.34.10.00306
ORF7a61T61delACT---66AY.46.10.00616
ORF7a61T61delACT---66B.1.177.200.009105
ORF7a61T61delACT---66B.1.2580.000399
ORF7a61T61delACT---66B.1.5950.001566
ORF7a61T61delACT---55AY.480.002326
ORF7a61T61delACT---55AY.700.001043
ORF7a61T61delACT---55AY.800.005643
ORF7a61T61delACT---55AY.930.001365
ORF7a61T61delACT---55AY.950.003805
ORF7a61T61delACT---55B.1.1.10.001633
ORF7a61T61delACT---55B.1.1.370.000964
ORF7a61T61delACT---55B.1.1.560.089286
ORF7a61T61delACT---55B.1.177.120.000758
ORF7a61T61delACT---55B.1.2340.00066
ORF7a61T61delACT---55B.1.258.170.00052
ORF7a61T61delACT---55B.1.3750.004098
ORF7a61T61delACT---55B.1.700.121951
ORF7a61T61delACT---44A0.001548
ORF7a61T61delACT---44AY.1010.001962
ORF7a61T61delACT---44AY.220.008368
ORF7a61T61delACT---44AY.240.001724
ORF7a61T61delACT---44AY.5.30.00135
ORF7a61T61delACT---44AY.530.00115
ORF7a61T61delACT---44AY.660.004278
ORF7a61T61delACT---44AY.690.000747
ORF7a61T61delACT---44AY.730.002661
ORF7a61T61delACT---44AY.790.004843
ORF7a61T61delACT---44AY.860.00332
ORF7a61T61delACT---44B.1.1.3180.001207
ORF7a61T61delACT---44B.1.351.20.00121
ORF7a61T61delACT---44B.1.360.000584
ORF7a61T61delACT---44B.1.466.20.001565
ORF7a61T61delACT---44Q.30.00058
ORF7a61T61delACT---33A.23.10.002113
ORF7a61T61delACT---33AY.110.004016
ORF7a61T61delACT---33AY.120.20.003856
ORF7a61T61delACT---33AY.120.2.10.001495
ORF7a61T61delACT---33AY.4.30.002525
ORF7a61T61delACT---33AY.400.002893
ORF7a61T61delACT---33AY.410.000882
ORF7a61T61delACT---33AY.640.001786
ORF7a61T61delACT---33AY.880.002653
ORF7a61T61delACT---33B.1.1.1180.030612
ORF7a61T61delACT---33B.1.1.1210.007282
ORF7a61T61delACT---33B.1.1.250.001706
ORF7a61T61delACT---33B.1.160.160.002788
ORF7a61T61delACT---33B.1.177.100.002634
ORF7a61T61delACT---33B.1.177.570.000843
ORF7a61T61delACT---33B.1.177.60.00293
ORF7a61T61delACT---33B.1.177.620.003576
ORF7a61T61delACT---33B.1.177.810.000568
ORF7a61T61delACT---33B.1.2210.000213
ORF7a61T61delACT---33B.1.3690.000856
ORF7a61T61delACT---33B.1.5750.00091
ORF7a61T61delACT---33B.1.621.10.001517
ORF7a61T61delACT---33B.1.6260.017143
ORF7a61T61delACT---22A.280.005291
ORF7a61T61delACT---22AD.20.000438
ORF7a61T61delACT---22AY.16.10.00094
ORF7a61T61delACT---22AY.20.000712
ORF7a61T61delACT---22AY.23.10.000835
ORF7a61T61delACT---22AY.39.20.003082
ORF7a61T61delACT---22AY.46.30.001867
ORF7a61T61delACT---22AY.490.00639
ORF7a61T61delACT---22AY.510.001818
ORF7a61T61delACT---22AY.720.002721
ORF7a61T61delACT---22AY.80.001212
ORF7a61T61delACT---22AZ.20.001642
ORF7a61T61delACT---22B.1.1.100.00223
ORF7a61T61delACT---22B.1.1.1630.015267
ORF7a61T61delACT---22B.1.1.1700.002494
ORF7a61T61delACT---22B.1.1.2190.01
ORF7a61T61delACT---22B.1.1.2200.003717
ORF7a61T61delACT---22B.1.1.3030.005525
ORF7a61T61delACT---22B.1.1.3170.000823
ORF7a61T61delACT---22B.1.1.3720.001377
ORF7a61T61delACT---22B.1.1.5210.010695
ORF7a61T61delACT---22B.1.1390.001466
ORF7a61T61delACT---22B.1.160.140.004237
ORF7a61T61delACT---22B.1.160.300.005952
ORF7a61T61delACT---22B.1.177.160.001329
ORF7a61T61delACT---22B.1.177.430.002954
ORF7a61T61delACT---22B.1.177.50.002484
ORF7a61T61delACT---22B.1.177.550.004662
ORF7a61T61delACT---22B.1.177.70.00033
ORF7a61T61delACT---22B.1.177.860.000367
ORF7a61T61delACT---22B.1.1900.02
ORF7a61T61delACT---22B.1.258.110.000793
ORF7a61T61delACT---22B.1.2640.024691
ORF7a61T61delACT---22B.1.3110.000549
ORF7a61T61delACT---22B.1.3490.00143
ORF7a61T61delACT---22B.1.36.90.006431
ORF7a61T61delACT---22B.1.4010.016393
ORF7a61T61delACT---22B.1.415.10.015152
ORF7a61T61delACT---22B.1.4700.002809
ORF7a61T61delACT---22B.1.5760.001813
ORF7a61T61delACT---22B.1.6090.000959
ORF7a61T61delACT---22B.1.617.10.000258
ORF7a61T61delACT---22B.1.617.30.00597
ORF7a61T61delACT---22B.1.6270.00404
ORF7a61T61delACT---22C.36.30.001134
ORF7a61T61delACT---22P.1.160.000748
ORF7a61T61delACT---22P.1.17.10.00175
ORF7a61T61delACT---22P.1.40.001953
ORF7a61T61delACT---22P.1.70.000639
ORF7a61T61delACT---11A.10.000282
ORF7a61T61delACT---11A.2.50.000499
ORF7a61T61delACT---11A.2.5.30.010309
ORF7a61T61delACT---11A.230.010526
ORF7a61T61delACT---11AA.70.009174
ORF7a61T61delACT---11AU.30.00211
ORF7a61T61delACT---11AY.1040.001984
ORF7a61T61delACT---11AY.380.000499
ORF7a61T61delACT---11AY.4.10.000737
ORF7a61T61delACT---11AY.500.000799
ORF7a61T61delACT---11AY.570.000656
ORF7a61T61delACT---11AY.630.000387
ORF7a61T61delACT---11AY.810.001992
ORF7a61T61delACT---11AY.890.004902
ORF7a61T61delACT---11AY.940.000443
ORF7a61T61delACT---11B0.000128
ORF7a61T61delACT---11B.1.1.1230.017857
ORF7a61T61delACT---11B.1.1.1350.004695
ORF7a61T61delACT---11B.1.1.1410.002012
ORF7a61T61delACT---11B.1.1.1570.000913
ORF7a61T61delACT---11B.1.1.1740.003378
ORF7a61T61delACT---11B.1.1.1920.002309
ORF7a61T61delACT---11B.1.1.1940.00495
ORF7a61T61delACT---11B.1.1.2050.003717
ORF7a61T61delACT---11B.1.1.2070.001182
ORF7a61T61delACT---11B.1.1.2090.008929
ORF7a61T61delACT---11B.1.1.2400.004695
ORF7a61T61delACT---11B.1.1.2410.00207
ORF7a61T61delACT---11B.1.1.2650.003155
ORF7a61T61delACT---11B.1.1.2770.000759
ORF7a61T61delACT---11B.1.1.2890.002083
ORF7a61T61delACT---11B.1.1.2980.000862
ORF7a61T61delACT---11B.1.1.3010.001179
ORF7a61T61delACT---11B.1.1.3110.000358
ORF7a61T61delACT---11B.1.1.3290.003846
ORF7a61T61delACT---11B.1.1.3370.003597
ORF7a61T61delACT---11B.1.1.3480.000796
ORF7a61T61delACT---11B.1.1.3660.015873
ORF7a61T61delACT---11B.1.1.3680.003086
ORF7a61T61delACT---11B.1.1.3760.005952
ORF7a61T61delACT---11B.1.1.390.00051
ORF7a61T61delACT---11B.1.1.4090.002833
ORF7a61T61delACT---11B.1.1.4320.001266
ORF7a61T61delACT---11B.1.1.4340.000349
ORF7a61T61delACT---11B.1.1.4370.010417
ORF7a61T61delACT---11B.1.1.4860.001577
ORF7a61T61delACT---11B.1.1.500.000679
ORF7a61T61delACT---11B.1.1.5250.005464
ORF7a61T61delACT---11B.1.1.700.000341
ORF7a61T61delACT---11B.1.1.830.00271
ORF7a61T61delACT---11B.1.1150.021739
ORF7a61T61delACT---11B.1.1280.000635
ORF7a61T61delACT---11B.1.1400.018868
ORF7a61T61delACT---11B.1.160.260.002421
ORF7a61T61delACT---11B.1.160.290.004219
ORF7a61T61delACT---11B.1.160.70.002079
ORF7a61T61delACT---11B.1.177.150.000631
ORF7a61T61delACT---11B.1.177.500.004695
ORF7a61T61delACT---11B.1.177.530.002392
ORF7a61T61delACT---11B.1.177.80.000752
ORF7a61T61delACT---11B.1.177.800.001912
ORF7a61T61delACT---11B.1.177.830.001481
ORF7a61T61delACT---11B.1.177.90.001332
ORF7a61T61delACT---11B.1.2130.014925
ORF7a61T61delACT---11B.1.2360.002053
ORF7a61T61delACT---11B.1.2400.000216
ORF7a61T61delACT---11B.1.2650.001271
ORF7a61T61delACT---11B.1.3200.001245
ORF7a61T61delACT---11B.1.351.30.000876
ORF7a61T61delACT---11B.1.36.190.009259
ORF7a61T61delACT---11B.1.36.350.002604
ORF7a61T61delACT---11B.1.36.380.001642
ORF7a61T61delACT---11B.1.3610.001289
ORF7a61T61delACT---11B.1.3710.001122
ORF7a61T61delACT---11B.1.3890.001002
ORF7a61T61delACT---11B.1.4040.001302
ORF7a61T61delACT---11B.1.4060.006061
ORF7a61T61delACT---11B.1.4090.000781
ORF7a61T61delACT---11B.1.416.10.001563
ORF7a61T61delACT---11B.1.438.10.000107
ORF7a61T61delACT---11B.1.4590.004082
ORF7a61T61delACT---11B.1.4680.005714
ORF7a61T61delACT---11B.1.4970.000315
ORF7a61T61delACT---11B.1.4990.00105
ORF7a61T61delACT---11B.1.5090.000866
ORF7a61T61delACT---11B.1.5170.000427
ORF7a61T61delACT---11B.1.5340.0125
ORF7a61T61delACT---11B.1.5350.028571
ORF7a61T61delACT---11B.1.5600.00463
ORF7a61T61delACT---11B.1.5640.000426
ORF7a61T61delACT---11B.1.5650.00081
ORF7a61T61delACT---11B.1.5680.001111
ORF7a61T61delACT---11B.1.5770.000687
ORF7a61T61delACT---11B.1.5820.000491
ORF7a61T61delACT---11B.1.5880.00091
ORF7a61T61delACT---11B.1.6230.000536
ORF7a61T61delACT---11B.1.6300.005236
ORF7a61T61delACT---11B.1.6380.052632
ORF7a61T61delACT---11B.1.9.10.032258
ORF7a61T61delACT---11B.110.005128
ORF7a61T61delACT---11B.30.000831
ORF7a61T61delACT---11B.390.002331
ORF7a61T61delACT---11B.400.000364
ORF7a61T61delACT---11C.280.04
ORF7a61T61delACT---11C.300.001727
ORF7a61T61delACT---11K.30.006173
ORF7a61T61delACT---11P.1.10.000318
ORF7a61T61delACT---11P.1.100.000269
ORF7a61T61delACT---11P.1.120.000484
ORF7a61T61delACT---11P.1.130.000898
ORF7a61T61delACT---11P.1.170.000162
ORF7a61T61delACT---11P.1.30.034483
ORF7a61T61delACT---11Q.40.000455
ORF7a61T61delACT---11Q.70.001111
ORF7a61T61delACT---11Z.10.00289