CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = T120del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a120T120del1delaCaa-a30120.427751-27753
ORF7a120T120del1delAca-ca30100.33333327751-27753
ORF7a120T120del1delacAac-3050.16666727751-27753
ORF7a120T120del1delACa-Na3020.066666727751-27753
ORF7a120T120del1delACA-NN3010.033333327751-27753

Details of the mutation T120del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a120T120del1aCaa-a1230All0.000002
ORF7a120T120del1Aca-ca1030All0.000002
ORF7a120T120del1acAac-530All0.000001
ORF7a120T120del1ACa-Na230All0
ORF7a120T120del1ACA-NN130All0
ORF7a120T120del1Aca-ca57B.1.1.70.000004
ORF7a120T120del1acAac-27B.1.1.70.000002
ORF7a120T120del1aCaa-a33AY.390.000074
ORF7a120T120del1ACa-Na22AY.260.000057
ORF7a120T120del1Aca-ca22B.1.1.1550.142857
ORF7a120T120del1aCaa-a22B.1.617.10.000258
ORF7a120T120del1aCaa-a22B.1.617.20.000008
ORF7a120T120del1aCaa-a11AY.160.00038
ORF7a120T120del1aCaa-a11AY.39.1.10.000725
ORF7a120T120del1Aca-ca11AY.40.000002
ORF7a120T120del1Aca-ca11AY.420.00004
ORF7a120T120del1aCaa-a11AY.430.000004
ORF7a120T120del1aCaa-a11AY.500.000799
ORF7a120T120del1aCaa-a11AY.610.000105
ORF7a120T120del1acAac-11B.10.000009
ORF7a120T120del1acAac-11B.1.20.000009
ORF7a120T120del1acAac-11B.1.6190.000871
ORF7a120T120del1ACA-NN11P.20.000187
ORF7a120T120del1Aca-ca11Q.80.000165