CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = S83del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a83S83del2delTCa--a1301140.87692327640-27642
ORF7a83S83del2deltCAt--130150.11538527640-27642
ORF7a83S83del2delTCAC--13010.0076923127640-27642

Details of the mutation S83del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a83S83del2TCa--a114130All0.000022
ORF7a83S83del2tCAt--15130All0.000003
ORF7a83S83del2TCAC--1130All0
ORF7a83S83del2TCa--a5155B.1.1.70.000046
ORF7a83S83del2tCAt--355B.1.1.70.000003
ORF7a83S83del2TCAC--155B.1.1.70.000001
ORF7a83S83del2TCa--a2020AY.390.000494
ORF7a83S83del2TCa--a1313AY.40.00002
ORF7a83S83del2tCAt--33AY.260.000085
ORF7a83S83del2TCa--a33AY.430.000013
ORF7a83S83del2TCa--a33AY.440.000018
ORF7a83S83del2TCa--a33AY.90.000203
ORF7a83S83del2TCa--a33AY.98.10.000145
ORF7a83S83del2TCa--a23B.1.617.20.000008
ORF7a83S83del2tCAt--13B.1.617.20.000004
ORF7a83S83del2tCAt--22AY.160.000759
ORF7a83S83del2TCa--a22B.10.000018
ORF7a83S83del2tCAt--22B.1.3510.000059
ORF7a83S83del2TCa--a11AY.1020.000027
ORF7a83S83del2TCa--a11AY.1030.000006
ORF7a83S83del2tCAt--11AY.1130.000142
ORF7a83S83del2TCa--a11AY.470.000031
ORF7a83S83del2tCAt--11AY.880.000884
ORF7a83S83del2TCa--a11AY.9.20.000037
ORF7a83S83del2TCa--a11AY.980.000079
ORF7a83S83del2tCAt--11B.1.1.2140.000055
ORF7a83S83del2TCa--a11B.1.177.210.000076
ORF7a83S83del2TCa--a11B.1.20.000009
ORF7a83S83del2TCa--a11B.1.4270.00005
ORF7a83S83del2TCa--a11B.1.466.20.000391
ORF7a83S83del2TCa--a11B.1.4990.00105
ORF7a83S83del2TCa--a11B.1.5260.000024
ORF7a83S83del2TCa--a11B.1.6210.000089
ORF7a83S83del2TCa--a11B.1.6280.000352
ORF7a83S83del2TCa--a11B.1.6370.000073
ORF7a83S83del2tCAt--11P.1.150.000232