CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = S83S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a83S83SsyntcAtcG1831060.57923527640-27642
ORF7a83S83SsyntcAtcT183660.36065627640-27642
ORF7a83S83SsyntcAtcC183100.054644827640-27642
ORF7a83S83SsynTCAAGT18310.0054644827640-27642

Details of the mutation S83S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a83S83StcAtcG106183All0.00002
ORF7a83S83StcAtcT66183All0.000013
ORF7a83S83StcAtcC10183All0.000002
ORF7a83S83STCAAGT1183All0
ORF7a83S83StcAtcG2528AY.250.00015
ORF7a83S83StcAtcT328AY.250.000018
ORF7a83S83StcAtcG1125B.1.1.70.00001
ORF7a83S83StcAtcT1025B.1.1.70.000009
ORF7a83S83StcAtcC425B.1.1.70.000004
ORF7a83S83StcAtcT2124AY.40.000033
ORF7a83S83StcAtcG324AY.40.000005
ORF7a83S83StcAtcG1214B.1.617.20.000045
ORF7a83S83StcAtcT214B.1.617.20.000008
ORF7a83S83StcAtcG1112AY.440.000067
ORF7a83S83StcAtcT112AY.440.000006
ORF7a83S83StcAtcT56AY.430.000022
ORF7a83S83StcAtcC16AY.430.000004
ORF7a83S83StcAtcG45AY.330.000267
ORF7a83S83StcAtcT15AY.330.000067
ORF7a83S83StcAtcG24AY.1030.000012
ORF7a83S83StcAtcT14AY.1030.000006
ORF7a83S83StcAtcC14AY.1030.000006
ORF7a83S83StcAtcG44B.1.1.5190.000159
ORF7a83S83StcAtcT44B.1.1770.000053
ORF7a83S83StcAtcG13AY.1000.000046
ORF7a83S83StcAtcC13AY.1000.000046
ORF7a83S83StcAtcT13AY.1000.000046
ORF7a83S83StcAtcC23B.10.000018
ORF7a83S83StcAtcT13B.10.000009
ORF7a83S83StcAtcT23B.1.1.390.001019
ORF7a83S83StcAtcG13B.1.1.390.00051
ORF7a83S83StcAtcG23B.1.20.000018
ORF7a83S83StcAtcT13B.1.20.000009
ORF7a83S83StcAtcG33B.1.4270.000151
ORF7a83S83StcAtcG22AY.140.000176
ORF7a83S83StcAtcG22AY.30.00002
ORF7a83S83StcAtcG22AY.400.001929
ORF7a83S83StcAtcG22AY.60.000082
ORF7a83S83StcAtcG22AY.99.20.000184
ORF7a83S83StcAtcT22B.1.160.320.008584
ORF7a83S83StcAtcG22B.1.36.10.002281
ORF7a83S83StcAtcG11A.2.40.003367
ORF7a83S83StcAtcG11AY.1180.000063
ORF7a83S83StcAtcT11AY.1190.000035
ORF7a83S83StcAtcG11AY.1210.000135
ORF7a83S83StcAtcG11AY.200.000039
ORF7a83S83StcAtcG11AY.290.000016
ORF7a83S83StcAtcG11AY.4.2.10.000149
ORF7a83S83StcAtcG11AY.450.000122
ORF7a83S83StcAtcG11AY.46.40.000165
ORF7a83S83StcAtcG11AY.880.000884
ORF7a83S83StcAtcT11B.1.10.000018
ORF7a83S83StcAtcG11B.1.1.1070.032258
ORF7a83S83StcAtcT11B.1.1.250.000569
ORF7a83S83StcAtcG11B.1.1600.000031
ORF7a83S83StcAtcT11B.1.160.120.00641
ORF7a83S83StcAtcT11B.1.160.200.008929
ORF7a83S83STCAAGT11B.1.177.210.000076
ORF7a83S83StcAtcT11B.1.177.440.000519
ORF7a83S83StcAtcT11B.1.177.870.000728
ORF7a83S83StcAtcG11B.1.2430.00007
ORF7a83S83StcAtcT11B.1.2580.000067
ORF7a83S83StcAtcT11B.1.3110.000275
ORF7a83S83StcAtcG11B.1.3510.00003
ORF7a83S83StcAtcG11B.1.351.20.000303
ORF7a83S83StcAtcT11B.1.4690.00361
ORF7a83S83StcAtcT11B.1.5260.000024
ORF7a83S83StcAtcC11C.370.000116
ORF7a83S83StcAtcG11P.10.000016