CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = S81del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a81S81del2delTCa--a44310.70454527634-27636
ORF7a81S81del2delTCA--N4480.18181827634-27636
ORF7a81S81del2deltCAt--4450.11363627634-27636

Details of the mutation S81del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a81S81del2TCa--a3144All0.000006
ORF7a81S81del2TCA--N844All0.000002
ORF7a81S81del2tCAt--544All0.000001
ORF7a81S81del2TCa--a611B.1.1.70.000005
ORF7a81S81del2TCA--N511B.1.1.70.000004
ORF7a81S81del2TCa--a77B.1.1770.000092
ORF7a81S81del2TCa--a66AY.40.000009
ORF7a81S81del2TCa--a55AY.440.00003
ORF7a81S81del2TCa--a34AY.1030.000019
ORF7a81S81del2tCAt--14AY.1030.000006
ORF7a81S81del2TCA--N11AY.1170.000085
ORF7a81S81del2tCAt--11AY.1190.000035
ORF7a81S81del2TCA--N11AY.30.00001
ORF7a81S81del2TCa--a11AY.3.10.000085
ORF7a81S81del2TCA--N11AY.39.10.00004
ORF7a81S81del2TCa--a11AY.98.10.000048
ORF7a81S81del2tCAt--11B.10.000009
ORF7a81S81del2TCa--a11B.1.1.5190.00004
ORF7a81S81del2tCAt--11B.1.20.000009
ORF7a81S81del2TCa--a11B.1.5260.000024
ORF7a81S81del2tCAt--11P.10.000016