CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = S81del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a81S81del1delTca-ca139930.66906527634-27636
ORF7a81S81del1deltcAtc-139420.30215827634-27636
ORF7a81S81del1delTCA-NN13940.02877727634-27636

Details of the mutation S81del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a81S81del1Tca-ca93139All0.000018
ORF7a81S81del1tcAtc-42139All0.000008
ORF7a81S81del1TCA-NN4139All0.000001
ORF7a81S81del1Tca-ca5969AY.40.000092
ORF7a81S81del1tcAtc-969AY.40.000014
ORF7a81S81del1TCA-NN169AY.40.000002
ORF7a81S81del1tcAtc-1214AY.1030.000075
ORF7a81S81del1Tca-ca214AY.1030.000012
ORF7a81S81del1Tca-ca1314AY.1200.000483
ORF7a81S81del1tcAtc-114AY.1200.000037
ORF7a81S81del1Tca-ca77AY.50.000145
ORF7a81S81del1Tca-ca34AY.390.000074
ORF7a81S81del1tcAtc-14AY.390.000025
ORF7a81S81del1tcAtc-44AY.440.000024
ORF7a81S81del1tcAtc-44AY.750.000224
ORF7a81S81del1tcAtc-23B.1.1.70.000002
ORF7a81S81del1Tca-ca13B.1.1.70.000001
ORF7a81S81del1Tca-ca12AY.1170.000085
ORF7a81S81del1tcAtc-12AY.1170.000085
ORF7a81S81del1tcAtc-22AY.200.000078
ORF7a81S81del1Tca-ca22AY.30.00002
ORF7a81S81del1TCA-NN22AY.430.000009
ORF7a81S81del1Tca-ca22B.1.20.000018
ORF7a81S81del1tcAtc-11AY.230.00007
ORF7a81S81del1TCA-NN11AY.250.000006
ORF7a81S81del1tcAtc-11AY.360.000148
ORF7a81S81del1Tca-ca11AY.420.00004
ORF7a81S81del1Tca-ca11AY.70.000196
ORF7a81S81del1tcAtc-11B.1.160.300.002976
ORF7a81S81del1tcAtc-11B.1.4290.000024
ORF7a81S81del1tcAtc-11B.1.5250.000113
ORF7a81S81del1tcAtc-11B.1.617.20.000004
ORF7a81S81del1Tca-ca11C.370.000116