CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = S37del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a37S37del1deltcTtc-32140.437527502-27504
ORF7a37S37del1delTcTCc-32130.4062527502-27504
ORF7a37S37del1deltCtt-t3220.062527502-27504
ORF7a37S37del1deltCTtT-3210.0312527502-27504
ORF7a37S37del1delTct-ct3210.0312527502-27504
ORF7a37S37del1delTCT-NN3210.0312527502-27504

Details of the mutation S37del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a37S37del1tcTtc-1432All0.000003
ORF7a37S37del1TcTCc-1332All0.000002
ORF7a37S37del1tCtt-t232All0
ORF7a37S37del1Tct-ct132All0
ORF7a37S37del1TCT-NN132All0
ORF7a37S37del1tCTtT-132All0
ORF7a37S37del1TcTCc-1314AY.1030.000081
ORF7a37S37del1tCTtT-114AY.1030.000006
ORF7a37S37del1tcTtc-77B.1.5250.000792
ORF7a37S37del1tcTtc-23B.1.1.70.000002
ORF7a37S37del1tCtt-t13B.1.1.70.000001
ORF7a37S37del1tcTtc-11AY.1100.000113
ORF7a37S37del1Tct-ct11AY.290.000016
ORF7a37S37del1TCT-NN11AY.30.00001
ORF7a37S37del1tcTtc-11B.1.177.630.002703
ORF7a37S37del1tcTtc-11B.1.20.000009
ORF7a37S37del1tcTtc-11B.1.214.20.0006
ORF7a37S37del1tCtt-t11B.1.4390.005917
ORF7a37S37del1tcTtc-11B.1.617.20.000004