CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = S37S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a37S37SsyntcTtcC7844650.59311227502-27504
ORF7a37S37SsyntcTtcA7842750.35076527502-27504
ORF7a37S37SsyntcTtcG784440.056122427502-27504

Details of the mutation S37S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a37S37StcTtcC465784All0.000089
ORF7a37S37StcTtcA275784All0.000053
ORF7a37S37StcTtcG44784All0.000008
ORF7a37S37StcTtcA84139B.1.1.70.000075
ORF7a37S37StcTtcC49139B.1.1.70.000044
ORF7a37S37StcTtcG6139B.1.1.70.000005
ORF7a37S37StcTtcC101111B.1.3510.003002
ORF7a37S37StcTtcA10111B.1.3510.000297
ORF7a37S37StcTtcC5960AY.1030.000366
ORF7a37S37StcTtcA160AY.1030.000006
ORF7a37S37StcTtcC2446AY.40.000037
ORF7a37S37StcTtcA2246AY.40.000034
ORF7a37S37StcTtcC4343B.1.1.5000.86
ORF7a37S37StcTtcC2438B.1.617.20.00009
ORF7a37S37StcTtcA838B.1.617.20.00003
ORF7a37S37StcTtcG638B.1.617.20.000023
ORF7a37S37StcTtcA2628AY.3.10.002217
ORF7a37S37StcTtcG228AY.3.10.000171
ORF7a37S37StcTtcA2525B.1.5260.000588
ORF7a37S37StcTtcA1823B.1.20.000158
ORF7a37S37StcTtcC423B.1.20.000035
ORF7a37S37StcTtcG123B.1.20.000009
ORF7a37S37StcTtcA1120B.10.000101
ORF7a37S37StcTtcC920B.10.000082
ORF7a37S37StcTtcC1718B.1.1770.000224
ORF7a37S37StcTtcG118B.1.1770.000013
ORF7a37S37StcTtcC1617AY.440.000097
ORF7a37S37StcTtcG117AY.440.000006
ORF7a37S37StcTtcG1717B.1.5250.001924
ORF7a37S37StcTtcC1515P.1.120.00726
ORF7a37S37StcTtcC1313AY.30.000129
ORF7a37S37StcTtcC1013B.1.2580.000665
ORF7a37S37StcTtcA313B.1.2580.0002
ORF7a37S37StcTtcA510AY.430.000022
ORF7a37S37StcTtcC310AY.430.000013
ORF7a37S37StcTtcG210AY.430.000009
ORF7a37S37StcTtcA1010B.1.5820.004907
ORF7a37S37StcTtcC89B.1.10.000145
ORF7a37S37StcTtcA19B.1.10.000018
ORF7a37S37StcTtcA69P.10.000095
ORF7a37S37StcTtcC39P.10.000047
ORF7a37S37StcTtcA68AY.250.000036
ORF7a37S37StcTtcC28AY.250.000012
ORF7a37S37StcTtcC66B.1.160.300.017857
ORF7a37S37StcTtcC45AY.390.000099
ORF7a37S37StcTtcA15AY.390.000025
ORF7a37S37StcTtcC44AY.1020.000106
ORF7a37S37StcTtcC44AY.1190.000141
ORF7a37S37StcTtcC44AY.500.003197
ORF7a37S37StcTtcA24AY.60.000082
ORF7a37S37StcTtcG24AY.60.000082
ORF7a37S37StcTtcA44B.1.3980.011905
ORF7a37S37StcTtcA44B.1.4290.000094
ORF7a37S37StcTtcC23AY.1170.000169
ORF7a37S37StcTtcA13AY.1170.000085
ORF7a37S37StcTtcC33AY.260.000085
ORF7a37S37StcTtcG33AY.98.10.000145
ORF7a37S37StcTtcC23B.1.1600.000062
ORF7a37S37StcTtcA13B.1.1600.000031
ORF7a37S37StcTtcA23B.1.6210.000177
ORF7a37S37StcTtcC13B.1.6210.000089
ORF7a37S37StcTtcA22AY.1000.000092
ORF7a37S37StcTtcC22AY.1200.000074
ORF7a37S37StcTtcC12AY.230.00007
ORF7a37S37StcTtcA12AY.230.00007
ORF7a37S37StcTtcC22AY.330.000134
ORF7a37S37StcTtcC22AY.9.20.000073
ORF7a37S37StcTtcC22B.1.1.2280.006098
ORF7a37S37StcTtcC12B.1.1.5190.00004
ORF7a37S37StcTtcA12B.1.1.5190.00004
ORF7a37S37StcTtcC22B.1.1390.001466
ORF7a37S37StcTtcG12P.1.140.000048
ORF7a37S37StcTtcC12P.1.140.000048
ORF7a37S37StcTtcC11A.20.000662
ORF7a37S37StcTtcC11AD.20.000219
ORF7a37S37StcTtcC11AY.1090.00074
ORF7a37S37StcTtcA11AY.210.001898
ORF7a37S37StcTtcC11AY.220.002092
ORF7a37S37StcTtcA11AY.240.000431
ORF7a37S37StcTtcA11AY.270.000065
ORF7a37S37StcTtcC11AY.340.000097
ORF7a37S37StcTtcA11AY.4.20.000022
ORF7a37S37StcTtcC11AY.4.50.000107
ORF7a37S37StcTtcC11AY.750.000056
ORF7a37S37StcTtcC11AY.90.000068
ORF7a37S37StcTtcC11AY.9.10.000084
ORF7a37S37StcTtcA11AY.980.000079
ORF7a37S37StcTtcC11B.1.1.2220.000204
ORF7a37S37StcTtcA11B.1.1.3120.001912
ORF7a37S37StcTtcA11B.1.1.3150.008475
ORF7a37S37StcTtcC11B.1.1.330.000421
ORF7a37S37StcTtcA11B.1.1.3480.000796
ORF7a37S37StcTtcC11B.1.1.470.005348
ORF7a37S37StcTtcC11B.1.1.5210.005348
ORF7a37S37StcTtcA11B.1.1.830.00271
ORF7a37S37StcTtcA11B.1.177.600.000218
ORF7a37S37StcTtcA11B.1.351.20.000303
ORF7a37S37StcTtcC11B.1.36.10.00114
ORF7a37S37StcTtcA11B.1.3690.000285
ORF7a37S37StcTtcA11B.1.4030.003268
ORF7a37S37StcTtcC11B.1.4090.000781
ORF7a37S37StcTtcG11B.1.4270.00005
ORF7a37S37StcTtcC11B.1.5610.000397
ORF7a37S37StcTtcC11B.1.5730.006098
ORF7a37S37StcTtcA11B.1.5960.000087
ORF7a37S37StcTtcA11B.1.6090.000479
ORF7a37S37StcTtcA11B.1.6120.002653
ORF7a37S37StcTtcC11B.1.617.10.000129
ORF7a37S37StcTtcC11B.1.670.043478
ORF7a37S37StcTtcC11B.400.000364
ORF7a37S37StcTtcA11B.60.00091
ORF7a37S37StcTtcA11C.10.002392
ORF7a37S37StcTtcC11C.140.004329
ORF7a37S37StcTtcA11C.370.000116
ORF7a37S37StcTtcG11D.20.000075
ORF7a37S37StcTtcC11P.1.170.000162
ORF7a37S37StcTtcA11R.10.00009