CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = Q62R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a62Q62RnonsyncAacGa4884760.9754127577-27579
ORF7a62Q62RnonsyncAAcGC48840.0081967227577-27579
ORF7a62Q62RnonsynCAaAGa48830.0061475427577-27579
ORF7a62Q62RnonsyncAAcGT48830.0061475427577-27579
ORF7a62Q62RnonsyncAAcGG48820.0040983627577-27579

Details of the mutation Q62R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a62Q62RcAacGa476488All0.000091
ORF7a62Q62RcAAcGC4488All0.000001
ORF7a62Q62RCAaAGa3488All0.000001
ORF7a62Q62RcAAcGT3488All0.000001
ORF7a62Q62RcAAcGG2488All0
ORF7a62Q62RcAacGa233233AY.4.20.005053
ORF7a62Q62RcAacGa3336AY.250.000198
ORF7a62Q62RcAAcGT336AY.250.000018
ORF7a62Q62RcAacGa3434B.1.2430.002366
ORF7a62Q62RcAacGa2123B.1.1.70.000019
ORF7a62Q62RCAaAGa123B.1.1.70.000001
ORF7a62Q62RcAAcGG123B.1.1.70.000001
ORF7a62Q62RcAacGa1818B.1.10.000327
ORF7a62Q62RcAacGa1717B.1.177.400.087629
ORF7a62Q62RcAacGa1616B.1.6250.037647
ORF7a62Q62RcAacGa1212AY.540.001144
ORF7a62Q62RcAacGa1111B.1.617.20.000041
ORF7a62Q62RcAacGa99AY.440.000055
ORF7a62Q62RcAacGa88P.10.000126
ORF7a62Q62RcAacGa66AY.40.000009
ORF7a62Q62RcAacGa55AY.1030.000031
ORF7a62Q62RcAAcGC35AY.430.000013
ORF7a62Q62RcAacGa15AY.430.000004
ORF7a62Q62RCAaAGa15AY.430.000004
ORF7a62Q62RcAacGa44AY.290.000063
ORF7a62Q62RcAacGa33AY.1020.00008
ORF7a62Q62RcAacGa33B.1.1.2070.003546
ORF7a62Q62RcAacGa22B.1.1.1010.02
ORF7a62Q62RcAacGa22B.1.1.2220.000408
ORF7a62Q62RcAacGa22B.1.177.210.000153
ORF7a62Q62RcAacGa22B.1.177.430.002954
ORF7a62Q62RcAacGa22B.1.3510.000059
ORF7a62Q62RcAacGa22B.1.4270.000101
ORF7a62Q62RcAacGa22B.1.5260.000047
ORF7a62Q62RcAacGa22B.1.564.10.003155
ORF7a62Q62RcAacGa12B.1.5960.000087
ORF7a62Q62RcAAcGG12B.1.5960.000087
ORF7a62Q62RcAacGa11A.270.001656
ORF7a62Q62RcAacGa11AY.1000.000046
ORF7a62Q62RcAacGa11AY.1200.000037
ORF7a62Q62RcAacGa11AY.16.10.00047
ORF7a62Q62RcAacGa11AY.230.00007
ORF7a62Q62RcAacGa11AY.330.000067
ORF7a62Q62RcAacGa11AY.370.000316
ORF7a62Q62RCAaAGa11AY.390.000025
ORF7a62Q62RcAacGa11AY.60.000041
ORF7a62Q62RcAacGa11AY.920.000287
ORF7a62Q62RcAAcGC11B.1.1.250.000569
ORF7a62Q62RcAacGa11B.1.1.2690.001353
ORF7a62Q62RcAacGa11B.1.1.2730.006757
ORF7a62Q62RcAacGa11B.1.1.3160.000925
ORF7a62Q62RcAacGa11B.1.1.3690.000446
ORF7a62Q62RcAacGa11B.1.1.5070.008696
ORF7a62Q62RcAacGa11B.1.1.5190.00004
ORF7a62Q62RcAacGa11B.1.1770.000013
ORF7a62Q62RcAacGa11B.1.177.630.002703
ORF7a62Q62RcAacGa11B.1.20.000009
ORF7a62Q62RcAacGa11B.1.36.180.00042
ORF7a62Q62RcAacGa11B.1.36.220.001208
ORF7a62Q62RcAacGa11B.1.3990.001934
ORF7a62Q62RcAacGa11B.1.438.10.000107
ORF7a62Q62RcAacGa11B.290.003509
ORF7a62Q62RcAacGa11P.1.120.000484
ORF7a62Q62RcAacGa11P.20.000187