CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF7a | 68 | P68del | del | CCT | --- | 30502 | 30502 | 1 | 27595-27597 |
Details of the mutation P68del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF7a | 68 | P68del | CCT | --- | 30502 | 30502 | All | 0.005834 |
ORF7a | 68 | P68del | CCT | --- | 12354 | 12354 | AY.4 | 0.019228 |
ORF7a | 68 | P68del | CCT | --- | 2711 | 2711 | B.1.617.2 | 0.010208 |
ORF7a | 68 | P68del | CCT | --- | 2537 | 2537 | AY.44 | 0.015442 |
ORF7a | 68 | P68del | CCT | --- | 2298 | 2298 | B.1.1.7 | 0.002057 |
ORF7a | 68 | P68del | CCT | --- | 1187 | 1187 | AY.43 | 0.005259 |
ORF7a | 68 | P68del | CCT | --- | 1186 | 1186 | AY.25 | 0.007134 |
ORF7a | 68 | P68del | CCT | --- | 607 | 607 | AY.103 | 0.003769 |
ORF7a | 68 | P68del | CCT | --- | 589 | 589 | AY.3 | 0.005858 |
ORF7a | 68 | P68del | CCT | --- | 553 | 553 | AY.120 | 0.02056 |
ORF7a | 68 | P68del | CCT | --- | 484 | 484 | AY.4.2 | 0.010497 |
ORF7a | 68 | P68del | CCT | --- | 448 | 448 | AY.3.1 | 0.038196 |
ORF7a | 68 | P68del | CCT | --- | 435 | 435 | AY.39 | 0.010749 |
ORF7a | 68 | P68del | CCT | --- | 400 | 400 | AY.26 | 0.011324 |
ORF7a | 68 | P68del | CCT | --- | 261 | 261 | AY.102 | 0.00692 |
ORF7a | 68 | P68del | CCT | --- | 223 | 223 | AY.29 | 0.003518 |
ORF7a | 68 | P68del | CCT | --- | 206 | 206 | B.1.351 | 0.006124 |
ORF7a | 68 | P68del | CCT | --- | 187 | 187 | B.1.177.21 | 0.0143 |
ORF7a | 68 | P68del | CCT | --- | 158 | 158 | AY.6 | 0.006498 |
ORF7a | 68 | P68del | CCT | --- | 138 | 138 | AY.100 | 0.006349 |
ORF7a | 68 | P68del | CCT | --- | 133 | 133 | B.1.2 | 0.001171 |
ORF7a | 68 | P68del | CCT | --- | 123 | 123 | B.1.526 | 0.002891 |
ORF7a | 68 | P68del | CCT | --- | 120 | 120 | AY.46.6 | 0.008665 |
ORF7a | 68 | P68del | CCT | --- | 117 | 117 | AY.119 | 0.004131 |
ORF7a | 68 | P68del | CCT | --- | 112 | 112 | B.1.177 | 0.001475 |
ORF7a | 68 | P68del | CCT | --- | 103 | 103 | AY.47 | 0.003204 |
ORF7a | 68 | P68del | CCT | --- | 92 | 92 | B.1 | 0.000843 |
ORF7a | 68 | P68del | CCT | --- | 89 | 89 | AY.5 | 0.001838 |
ORF7a | 68 | P68del | CCT | --- | 85 | 85 | AY.46.4 | 0.013983 |
ORF7a | 68 | P68del | CCT | --- | 76 | 76 | P.1 | 0.001197 |
ORF7a | 68 | P68del | CCT | --- | 64 | 64 | AY.113 | 0.009113 |
ORF7a | 68 | P68del | CCT | --- | 64 | 64 | B.1.621 | 0.005665 |
ORF7a | 68 | P68del | CCT | --- | 63 | 63 | AY.20 | 0.002449 |
ORF7a | 68 | P68del | CCT | --- | 61 | 61 | AY.75 | 0.003417 |
ORF7a | 68 | P68del | CCT | --- | 56 | 56 | AY.42 | 0.002253 |
ORF7a | 68 | P68del | CCT | --- | 53 | 53 | AY.23 | 0.003697 |
ORF7a | 68 | P68del | CCT | --- | 53 | 53 | AY.39.1 | 0.0021 |
ORF7a | 68 | P68del | CCT | --- | 50 | 50 | AY.46 | 0.005204 |
ORF7a | 68 | P68del | CCT | --- | 50 | 50 | B.1.1.284 | 0.00537 |
ORF7a | 68 | P68del | CCT | --- | 49 | 49 | AY.33 | 0.003272 |
ORF7a | 68 | P68del | CCT | --- | 49 | 49 | B.1.429 | 0.001153 |
ORF7a | 68 | P68del | CCT | --- | 44 | 44 | AY.117 | 0.003719 |
ORF7a | 68 | P68del | CCT | --- | 43 | 43 | AY.86 | 0.035685 |
ORF7a | 68 | P68del | CCT | --- | 42 | 42 | AY.107 | 0.019571 |
ORF7a | 68 | P68del | CCT | --- | 42 | 42 | B.1.160 | 0.00131 |
ORF7a | 68 | P68del | CCT | --- | 39 | 39 | B.1.637 | 0.00285 |
ORF7a | 68 | P68del | CCT | --- | 37 | 37 | AY.45 | 0.004502 |
ORF7a | 68 | P68del | CCT | --- | 36 | 36 | B.1.1 | 0.000653 |
ORF7a | 68 | P68del | CCT | --- | 35 | 35 | AY.54 | 0.003337 |
ORF7a | 68 | P68del | CCT | --- | 35 | 35 | B.1.1.214 | 0.001941 |
ORF7a | 68 | P68del | CCT | --- | 35 | 35 | B.1.628 | 0.012333 |
ORF7a | 68 | P68del | CCT | --- | 35 | 35 | C.37 | 0.004062 |
ORF7a | 68 | P68del | CCT | --- | 34 | 34 | AY.98 | 0.002686 |
ORF7a | 68 | P68del | CCT | --- | 33 | 33 | AY.36 | 0.004891 |
ORF7a | 68 | P68del | CCT | --- | 33 | 33 | AY.37 | 0.01043 |
ORF7a | 68 | P68del | CCT | --- | 32 | 32 | AY.7 | 0.006272 |
ORF7a | 68 | P68del | CCT | --- | 31 | 31 | AY.34 | 0.003006 |
ORF7a | 68 | P68del | CCT | --- | 31 | 31 | AY.98.1 | 0.001501 |
ORF7a | 68 | P68del | CCT | --- | 30 | 30 | AY.5.4 | 0.008301 |
ORF7a | 68 | P68del | CCT | --- | 30 | 30 | AY.99.2 | 0.002765 |
ORF7a | 68 | P68del | CCT | --- | 29 | 29 | AY.118 | 0.001817 |
ORF7a | 68 | P68del | CCT | --- | 28 | 28 | AY.7.2 | 0.01566 |
ORF7a | 68 | P68del | CCT | --- | 26 | 26 | AY.9 | 0.001757 |
ORF7a | 68 | P68del | CCT | --- | 25 | 25 | AY.110 | 0.002817 |
ORF7a | 68 | P68del | CCT | --- | 25 | 25 | AY.114 | 0.005778 |
ORF7a | 68 | P68del | CCT | --- | 25 | 25 | AY.121 | 0.003383 |
ORF7a | 68 | P68del | CCT | --- | 25 | 25 | B.1.1.519 | 0.000993 |
ORF7a | 68 | P68del | CCT | --- | 25 | 25 | B.1.596 | 0.002178 |
ORF7a | 68 | P68del | CCT | --- | 22 | 22 | AY.9.1 | 0.001842 |
ORF7a | 68 | P68del | CCT | --- | 22 | 22 | B.1.427 | 0.001111 |
ORF7a | 68 | P68del | CCT | --- | 22 | 22 | R.1 | 0.00198 |
ORF7a | 68 | P68del | CCT | --- | 21 | 21 | AY.9.2 | 0.000771 |
ORF7a | 68 | P68del | CCT | --- | 20 | 20 | AY.106 | 0.006698 |
ORF7a | 68 | P68del | CCT | --- | 19 | 19 | AY.35 | 0.004428 |
ORF7a | 68 | P68del | CCT | --- | 19 | 19 | AY.61 | 0.001991 |
ORF7a | 68 | P68del | CCT | --- | 17 | 17 | AY.30 | 0.006727 |
ORF7a | 68 | P68del | CCT | --- | 15 | 15 | AY.111 | 0.002747 |
ORF7a | 68 | P68del | CCT | --- | 15 | 15 | AY.120.1 | 0.004815 |
ORF7a | 68 | P68del | CCT | --- | 15 | 15 | AY.87 | 0.01249 |
ORF7a | 68 | P68del | CCT | --- | 14 | 14 | B.1.1.258 | 0.045603 |
ORF7a | 68 | P68del | CCT | --- | 13 | 13 | AY.116 | 0.003728 |
ORF7a | 68 | P68del | CCT | --- | 13 | 13 | AY.68 | 0.003559 |
ORF7a | 68 | P68del | CCT | --- | 13 | 13 | P.1.14 | 0.000621 |
ORF7a | 68 | P68del | CCT | --- | 12 | 12 | AY.12 | 0.003793 |
ORF7a | 68 | P68del | CCT | --- | 12 | 12 | AY.14 | 0.001056 |
ORF7a | 68 | P68del | CCT | --- | 12 | 12 | AY.46.2 | 0.007624 |
ORF7a | 68 | P68del | CCT | --- | 12 | 12 | AY.84 | 0.005249 |
ORF7a | 68 | P68del | CCT | --- | 12 | 12 | AY.99 | 0.012592 |
ORF7a | 68 | P68del | CCT | --- | 12 | 12 | B.1.324 | 0.019262 |
ORF7a | 68 | P68del | CCT | --- | 11 | 11 | B.1.177.15 | 0.00694 |
ORF7a | 68 | P68del | CCT | --- | 11 | 11 | B.1.234 | 0.001451 |
ORF7a | 68 | P68del | CCT | --- | 11 | 11 | Q.8 | 0.001814 |
ORF7a | 68 | P68del | CCT | --- | 10 | 10 | AY.13 | 0.00161 |
ORF7a | 68 | P68del | CCT | --- | 10 | 10 | AY.46.5 | 0.001984 |
ORF7a | 68 | P68del | CCT | --- | 10 | 10 | AY.71 | 0.004751 |
ORF7a | 68 | P68del | CCT | --- | 10 | 10 | B.1.525 | 0.001132 |
ORF7a | 68 | P68del | CCT | --- | 9 | 9 | AY.4.2.1 | 0.001341 |
ORF7a | 68 | P68del | CCT | --- | 9 | 9 | AY.7.1 | 0.001014 |
ORF7a | 68 | P68del | CCT | --- | 9 | 9 | AY.74 | 0.001041 |
ORF7a | 68 | P68del | CCT | --- | 9 | 9 | B.1.258.9 | 0.045 |
ORF7a | 68 | P68del | CCT | --- | 9 | 9 | L.1 | 0.017143 |
ORF7a | 68 | P68del | CCT | --- | 8 | 8 | AY.10 | 0.00424 |
ORF7a | 68 | P68del | CCT | --- | 8 | 8 | AY.4.5 | 0.00086 |
ORF7a | 68 | P68del | CCT | --- | 8 | 8 | B.1.1.231 | 0.024768 |
ORF7a | 68 | P68del | CCT | --- | 8 | 8 | P.1.15 | 0.001859 |
ORF7a | 68 | P68del | CCT | --- | 7 | 7 | AY.19 | 0.007982 |
ORF7a | 68 | P68del | CCT | --- | 7 | 7 | AY.34.1 | 0.00357 |
ORF7a | 68 | P68del | CCT | --- | 7 | 7 | AY.49 | 0.022364 |
ORF7a | 68 | P68del | CCT | --- | 7 | 7 | AY.59 | 0.003708 |
ORF7a | 68 | P68del | CCT | --- | 7 | 7 | B.1.243 | 0.000487 |
ORF7a | 68 | P68del | CCT | --- | 6 | 6 | AY.16 | 0.002278 |
ORF7a | 68 | P68del | CCT | --- | 6 | 6 | AY.29.1 | 0.001323 |
ORF7a | 68 | P68del | CCT | --- | 6 | 6 | AY.40 | 0.005786 |
ORF7a | 68 | P68del | CCT | --- | 6 | 6 | AY.65 | 0.003198 |
ORF7a | 68 | P68del | CCT | --- | 6 | 6 | AY.73 | 0.003992 |
ORF7a | 68 | P68del | CCT | --- | 6 | 6 | B.1.1.33 | 0.002525 |
ORF7a | 68 | P68del | CCT | --- | 6 | 6 | B.1.214.2 | 0.003597 |
ORF7a | 68 | P68del | CCT | --- | 5 | 5 | A | 0.001935 |
ORF7a | 68 | P68del | CCT | --- | 5 | 5 | AY.109 | 0.003698 |
ORF7a | 68 | P68del | CCT | --- | 5 | 5 | AY.24 | 0.002155 |
ORF7a | 68 | P68del | CCT | --- | 5 | 5 | AY.27 | 0.000324 |
ORF7a | 68 | P68del | CCT | --- | 5 | 5 | AY.46.1 | 0.005133 |
ORF7a | 68 | P68del | CCT | --- | 5 | 5 | AY.62 | 0.002179 |
ORF7a | 68 | P68del | CCT | --- | 5 | 5 | AY.80 | 0.005643 |
ORF7a | 68 | P68del | CCT | --- | 5 | 5 | AY.91 | 0.003652 |
ORF7a | 68 | P68del | CCT | --- | 5 | 5 | AY.95 | 0.003805 |
ORF7a | 68 | P68del | CCT | --- | 5 | 5 | B.1.1.56 | 0.089286 |
ORF7a | 68 | P68del | CCT | --- | 5 | 5 | B.1.375 | 0.004098 |
ORF7a | 68 | P68del | CCT | --- | 5 | 5 | B.1.595 | 0.001305 |
ORF7a | 68 | P68del | CCT | --- | 5 | 5 | B.1.623 | 0.002682 |
ORF7a | 68 | P68del | CCT | --- | 5 | 5 | B.1.70 | 0.121951 |
ORF7a | 68 | P68del | CCT | --- | 5 | 5 | P.1.7 | 0.001596 |
ORF7a | 68 | P68del | CCT | --- | 5 | 5 | P.2 | 0.000933 |
ORF7a | 68 | P68del | CCT | --- | 5 | 5 | Q.1 | 0.000632 |
ORF7a | 68 | P68del | CCT | --- | 4 | 4 | AY.120.2 | 0.005141 |
ORF7a | 68 | P68del | CCT | --- | 4 | 4 | AY.2 | 0.001425 |
ORF7a | 68 | P68del | CCT | --- | 4 | 4 | AY.5.2 | 0.009852 |
ORF7a | 68 | P68del | CCT | --- | 4 | 4 | AY.5.3 | 0.00135 |
ORF7a | 68 | P68del | CCT | --- | 4 | 4 | AY.66 | 0.004278 |
ORF7a | 68 | P68del | CCT | --- | 4 | 4 | AY.88 | 0.003537 |
ORF7a | 68 | P68del | CCT | --- | 4 | 4 | AY.92 | 0.001149 |
ORF7a | 68 | P68del | CCT | --- | 4 | 4 | AY.93 | 0.001092 |
ORF7a | 68 | P68del | CCT | --- | 4 | 4 | B.1.1.1 | 0.001307 |
ORF7a | 68 | P68del | CCT | --- | 4 | 4 | B.1.1.164 | 0.020619 |
ORF7a | 68 | P68del | CCT | --- | 4 | 4 | B.1.1.37 | 0.000771 |
ORF7a | 68 | P68del | CCT | --- | 4 | 4 | B.1.258 | 0.000266 |
ORF7a | 68 | P68del | CCT | --- | 4 | 4 | B.1.351.2 | 0.00121 |
ORF7a | 68 | P68del | CCT | --- | 4 | 4 | B.1.36 | 0.000584 |
ORF7a | 68 | P68del | CCT | --- | 4 | 4 | B.1.466.2 | 0.001565 |
ORF7a | 68 | P68del | CCT | --- | 4 | 4 | B.1.577 | 0.002749 |
ORF7a | 68 | P68del | CCT | --- | 4 | 4 | D.2 | 0.0003 |
ORF7a | 68 | P68del | CCT | --- | 3 | 3 | AY.105 | 0.001929 |
ORF7a | 68 | P68del | CCT | --- | 3 | 3 | AY.116.1 | 0.000934 |
ORF7a | 68 | P68del | CCT | --- | 3 | 3 | AY.48 | 0.001395 |
ORF7a | 68 | P68del | CCT | --- | 3 | 3 | AY.64 | 0.001786 |
ORF7a | 68 | P68del | CCT | --- | 3 | 3 | AY.69 | 0.00056 |
ORF7a | 68 | P68del | CCT | --- | 3 | 3 | AY.85 | 0.001282 |
ORF7a | 68 | P68del | CCT | --- | 3 | 3 | AY.90 | 0.002053 |
ORF7a | 68 | P68del | CCT | --- | 3 | 3 | B.1.1.121 | 0.007282 |
ORF7a | 68 | P68del | CCT | --- | 3 | 3 | B.1.1.189 | 0.004539 |
ORF7a | 68 | P68del | CCT | --- | 3 | 3 | B.1.1.222 | 0.000612 |
ORF7a | 68 | P68del | CCT | --- | 3 | 3 | B.1.1.25 | 0.001706 |
ORF7a | 68 | P68del | CCT | --- | 3 | 3 | B.1.1.318 | 0.000905 |
ORF7a | 68 | P68del | CCT | --- | 3 | 3 | B.1.177.57 | 0.000843 |
ORF7a | 68 | P68del | CCT | --- | 3 | 3 | B.1.177.6 | 0.00293 |
ORF7a | 68 | P68del | CCT | --- | 3 | 3 | B.1.177.7 | 0.000495 |
ORF7a | 68 | P68del | CCT | --- | 3 | 3 | B.1.221 | 0.000213 |
ORF7a | 68 | P68del | CCT | --- | 3 | 3 | B.1.258.17 | 0.000312 |
ORF7a | 68 | P68del | CCT | --- | 3 | 3 | B.1.311 | 0.000824 |
ORF7a | 68 | P68del | CCT | --- | 3 | 3 | B.1.36.36 | 0.001806 |
ORF7a | 68 | P68del | CCT | --- | 3 | 3 | B.1.369 | 0.000856 |
ORF7a | 68 | P68del | CCT | --- | 3 | 3 | B.1.575 | 0.00091 |
ORF7a | 68 | P68del | CCT | --- | 3 | 3 | B.1.617.1 | 0.000387 |
ORF7a | 68 | P68del | CCT | --- | 3 | 3 | B.1.626 | 0.017143 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | A.28 | 0.005291 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | AD.2 | 0.000438 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | AY.1 | 0.000791 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | AY.101 | 0.000981 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | AY.108 | 0.002205 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | AY.22 | 0.004184 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | AY.38 | 0.000999 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | AY.4.4 | 0.000818 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | AY.41 | 0.000588 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | AY.51 | 0.001818 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | AY.52 | 0.001629 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | AY.53 | 0.000575 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | AY.70 | 0.000417 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | AY.75.1 | 0.000361 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | AY.79 | 0.002421 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | AY.8 | 0.001212 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | AY.82 | 0.002714 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | AZ.2 | 0.001642 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.1.101 | 0.02 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.1.163 | 0.015267 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.1.170 | 0.002494 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.1.192 | 0.004619 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.1.220 | 0.003717 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.1.265 | 0.006309 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.1.303 | 0.005525 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.1.311 | 0.000716 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.1.317 | 0.000823 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.1.372 | 0.001377 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.1.432 | 0.002532 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.1.521 | 0.010695 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.128 | 0.001271 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.139 | 0.001466 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.160.16 | 0.001859 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.160.30 | 0.005952 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.177.10 | 0.001756 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.177.4 | 0.000422 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.177.55 | 0.004662 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.177.81 | 0.000379 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.177.82 | 0.000955 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.177.86 | 0.000367 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.190 | 0.02 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.240 | 0.000431 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.258.11 | 0.000793 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.349 | 0.00143 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.356 | 0.003454 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.36.9 | 0.006431 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.396 | 0.001411 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.499 | 0.002101 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.561 | 0.000794 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | B.1.621.1 | 0.001012 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | C.36.3 | 0.001134 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | P.1.1 | 0.000635 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | P.1.13 | 0.001797 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | P.1.17.1 | 0.00175 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | P.1.2 | 0.002312 |
ORF7a | 68 | P68del | CCT | --- | 2 | 2 | Q.4 | 0.00091 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | A.1 | 0.000282 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | A.2.5 | 0.000499 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | A.23 | 0.010526 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | A.23.1 | 0.000704 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | AU.3 | 0.00211 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | AY.104 | 0.001984 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | AY.120.2.1 | 0.000498 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | AY.23.1 | 0.000417 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | AY.28 | 0.00189 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | AY.32 | 0.000532 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | AY.39.2 | 0.001541 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | AY.4.1 | 0.000737 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | AY.4.3 | 0.000842 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | AY.50 | 0.000799 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | AY.63 | 0.000387 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | AY.67 | 0.000464 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | AY.78 | 0.001541 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | AY.81 | 0.001992 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | AY.89 | 0.004902 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | AY.94 | 0.000443 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B | 0.000128 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.1.10 | 0.001115 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.1.123 | 0.017857 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.1.135 | 0.004695 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.1.141 | 0.002012 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.1.174 | 0.003378 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.1.194 | 0.00495 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.1.205 | 0.003717 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.1.207 | 0.001182 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.1.209 | 0.008929 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.1.241 | 0.00207 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.1.253 | 0.002506 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.1.277 | 0.000759 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.1.298 | 0.000862 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.1.301 | 0.001179 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.1.366 | 0.015873 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.1.383 | 0.0625 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.1.39 | 0.00051 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.1.437 | 0.010417 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.1.523 | 0.001563 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.115 | 0.021739 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.177.16 | 0.000664 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.177.50 | 0.004695 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.177.60 | 0.000218 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.177.62 | 0.001192 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.177.83 | 0.001481 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.201 | 0.005682 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.206 | 0.000816 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.220 | 0.01087 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.236 | 0.002053 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.265 | 0.001271 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.319 | 0.003049 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.351.3 | 0.000876 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.36.17 | 0.000494 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.36.35 | 0.002604 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.36.38 | 0.001642 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.371 | 0.001122 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.380 | 0.006623 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.389 | 0.001002 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.406 | 0.006061 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.416 | 0.001269 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.416.1 | 0.001563 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.433 | 0.003195 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.438.1 | 0.000107 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.443 | 0.004673 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.459 | 0.004082 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.468 | 0.005714 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.470 | 0.001404 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.471 | 0.002732 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.509 | 0.000866 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.517 | 0.000427 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.535 | 0.028571 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.545 | 0.014493 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.560 | 0.00463 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.564 | 0.000426 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.564.1 | 0.001577 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.568 | 0.001111 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.576 | 0.000907 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.582 | 0.000491 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.588 | 0.00091 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.617.3 | 0.002985 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.627 | 0.00202 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.638 | 0.052632 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.88.1 | 0.004808 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.1.9.1 | 0.032258 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.11 | 0.005128 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | B.40 | 0.000364 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | C.30 | 0.001727 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | C.36.3.1 | 0.002717 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | K.3 | 0.006173 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | N.5 | 0.001767 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | P.1.10 | 0.000269 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | P.1.12 | 0.000484 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | P.1.16 | 0.000374 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | P.1.17 | 0.000162 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | P.1.3 | 0.034483 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | P.1.4 | 0.000977 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | P.1.8 | 0.004785 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | Q.7 | 0.001111 |
ORF7a | 68 | P68del | CCT | --- | 1 | 1 | Z.1 | 0.00289 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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