CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = P45R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a45P45RnonsyncCacGa101610120.99606327526-27528
ORF7a45P45RnonsyncCAcGT101620.001968527526-27528
ORF7a45P45RnonsyncCAcGG101610.00098425227526-27528
ORF7a45P45RnonsynCCaAGa101610.00098425227526-27528

Details of the mutation P45R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a45P45RcCacGa10121016All0.000194
ORF7a45P45RcCAcGT21016All0
ORF7a45P45RcCAcGG11016All0
ORF7a45P45RCCaAGa11016All0
ORF7a45P45RcCacGa901901B.1.1600.0281
ORF7a45P45RcCacGa3536B.1.617.20.000132
ORF7a45P45RcCAcGT136B.1.617.20.000004
ORF7a45P45RcCacGa3131AY.610.003248
ORF7a45P45RcCacGa1111AY.1020.000292
ORF7a45P45RcCacGa77B.1.1.70.000006
ORF7a45P45RcCacGa44AY.430.000018
ORF7a45P45RcCacGa33AY.260.000085
ORF7a45P45RcCacGa22AY.160.000759
ORF7a45P45RCCaAGa12AY.250.000006
ORF7a45P45RcCAcGT12AY.250.000006
ORF7a45P45RcCacGa22AY.360.000296
ORF7a45P45RcCacGa22AY.40.000003
ORF7a45P45RcCacGa22B.10.000018
ORF7a45P45RcCacGa22B.1.2580.000133
ORF7a45P45RcCacGa11AY.1010.00049
ORF7a45P45RcCacGa11AY.1030.000006
ORF7a45P45RcCacGa11AY.230.00007
ORF7a45P45RcCacGa11AY.440.000006
ORF7a45P45RcCacGa11AY.980.000079
ORF7a45P45RcCacGa11B.1.10.000018
ORF7a45P45RcCacGa11B.1.160.140.002119
ORF7a45P45RcCacGa11B.1.160.330.004425
ORF7a45P45RcCAcGG11B.1.3510.00003
ORF7a45P45RcCacGa11B.1.4730.019231
ORF7a45P45RcCacGa11C.36.30.000567