CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = P34del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a34P34del2delcCTc--1690.562527493-27495
ORF7a34P34del2delCCt--t1650.312527493-27495
ORF7a34P34del2delCCTT--1610.062527493-27495
ORF7a34P34del2delCCT--N1610.062527493-27495

Details of the mutation P34del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a34P34del2cCTc--916All0.000002
ORF7a34P34del2CCt--t516All0.000001
ORF7a34P34del2CCT--N116All0
ORF7a34P34del2CCTT--116All0
ORF7a34P34del2cCTc--49B.1.1.70.000004
ORF7a34P34del2CCt--t39B.1.1.70.000003
ORF7a34P34del2CCT--N19B.1.1.70.000001
ORF7a34P34del2CCTT--19B.1.1.70.000001
ORF7a34P34del2cCTc--22AY.200.000078
ORF7a34P34del2cCTc--11A.10.000282
ORF7a34P34del2cCTc--11AY.1000.000046
ORF7a34P34del2CCt--t11AY.1180.000063
ORF7a34P34del2CCt--t11B.1.1600.000031
ORF7a34P34del2cCTc--11B.1.1770.000013