CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = N52X

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a52N52XnonsynAaCTaA1890.527547-27549
ORF7a52N52XnonsynAACTGA1880.44444427547-27549
ORF7a52N52XnonsynAaCTaG1810.055555627547-27549

Details of the mutation N52X within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a52N52XAaCTaA918All0.000002
ORF7a52N52XAACTGA818All0.000002
ORF7a52N52XAaCTaG118All0
ORF7a52N52XAaCTaA714AY.250.000042
ORF7a52N52XAACTGA614AY.250.000036
ORF7a52N52XAaCTaG114AY.250.000006
ORF7a52N52XAaCTaA24B.1.177.210.000153
ORF7a52N52XAACTGA24B.1.177.210.000153