CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = N52T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a52N52TnonsynaAcaCc31230.74193527547-27549
ORF7a52N52TnonsynaACaCA3150.1612927547-27549
ORF7a52N52TnonsynaACaCT3130.096774227547-27549

Details of the mutation N52T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a52N52TaAcaCc2331All0.000004
ORF7a52N52TaACaCA531All0.000001
ORF7a52N52TaACaCT331All0.000001
ORF7a52N52TaAcaCc66B.10.000055
ORF7a52N52TaAcaCc35B.1.617.20.000011
ORF7a52N52TaACaCT15B.1.617.20.000004
ORF7a52N52TaACaCA15B.1.617.20.000004
ORF7a52N52TaAcaCc34B.1.1.70.000003
ORF7a52N52TaACaCT14B.1.1.70.000001
ORF7a52N52TaAcaCc13AY.250.000006
ORF7a52N52TaACaCT13AY.250.000006
ORF7a52N52TaACaCA13AY.250.000006
ORF7a52N52TaAcaCc220.111111
ORF7a52N52TaAcaCc22B.1.20.000018
ORF7a52N52TaAcaCc12B.1.5880.00091
ORF7a52N52TaACaCA12B.1.5880.00091
ORF7a52N52TaAcaCc11AY.40.000002
ORF7a52N52TaAcaCc11AY.430.000004
ORF7a52N52TaAcaCc11B.1.1.2220.000204
ORF7a52N52TaACaCA11B.1.36.100.004785
ORF7a52N52TaAcaCc11B.1.36.290.000517
ORF7a52N52TaACaCA11B.1.5250.000113
ORF7a52N52TaAcaCc11B.60.00091