CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = N52L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a52N52LnonsynAACCTA59460.77966127547-27549
ORF7a52N52LnonsynAACTTA5990.15254227547-27549
ORF7a52N52LnonsynAACCTT5940.067796627547-27549

Details of the mutation N52L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a52N52LAACCTA4659All0.000009
ORF7a52N52LAACTTA959All0.000002
ORF7a52N52LAACCTT459All0.000001
ORF7a52N52LAACCTA4242AY.1200.001562
ORF7a52N52LAACTTA914AY.250.000054
ORF7a52N52LAACCTA314AY.250.000018
ORF7a52N52LAACCTT214AY.250.000012
ORF7a52N52LAACCTT23B.1.617.20.000008
ORF7a52N52LAACCTA13B.1.617.20.000004