CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = N52K

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a52N52KnonsynaaCaaA1901610.84736827547-27549
ORF7a52N52KnonsynaaCaaG190290.15263227547-27549

Details of the mutation N52K within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a52N52KaaCaaA161190All0.000031
ORF7a52N52KaaCaaG29190All0.000006
ORF7a52N52KaaCaaA3336B.1.1.70.00003
ORF7a52N52KaaCaaG336B.1.1.70.000003
ORF7a52N52KaaCaaA2021B.1.617.20.000075
ORF7a52N52KaaCaaG121B.1.617.20.000004
ORF7a52N52KaaCaaA1819AY.1000.000828
ORF7a52N52KaaCaaG119AY.1000.000046
ORF7a52N52KaaCaaA1213AY.250.000072
ORF7a52N52KaaCaaG113AY.250.000006
ORF7a52N52KaaCaaG1212B.1.5260.000282
ORF7a52N52KaaCaaA99AY.1030.000056
ORF7a52N52KaaCaaA99AY.290.000142
ORF7a52N52KaaCaaA89AY.430.000035
ORF7a52N52KaaCaaG19AY.430.000004
ORF7a52N52KaaCaaA88AY.40.000012
ORF7a52N52KaaCaaA88B.1.258.170.000832
ORF7a52N52KaaCaaA77B.1.1770.000092
ORF7a52N52KaaCaaA44AY.30.00004
ORF7a52N52KaaCaaA34B.1.4290.000071
ORF7a52N52KaaCaaG14B.1.4290.000024
ORF7a52N52KaaCaaG22AY.39.10.000079
ORF7a52N52KaaCaaA22AY.440.000012
ORF7a52N52KaaCaaA22AY.99.20.000184
ORF7a52N52KaaCaaG12B.10.000009
ORF7a52N52KaaCaaA12B.10.000009
ORF7a52N52KaaCaaA22B.1.1.370.000386
ORF7a52N52KaaCaaA22B.1.1260.002551
ORF7a52N52KaaCaaA22P.1.140.000096
ORF7a52N52KaaCaaA11AY.1130.000142
ORF7a52N52KaaCaaG11AY.1190.000035
ORF7a52N52KaaCaaG11AY.270.000065
ORF7a52N52KaaCaaA11AY.330.000067
ORF7a52N52KaaCaaG11AY.46.40.000165
ORF7a52N52KaaCaaA11AY.980.000079
ORF7a52N52KaaCaaA11B.1.1.4480.002033
ORF7a52N52KaaCaaG11B.1.1.5190.00004
ORF7a52N52KaaCaaG11B.1.177.810.000189
ORF7a52N52KaaCaaA11B.1.177.830.001481
ORF7a52N52KaaCaaA11B.1.3510.00003
ORF7a52N52KaaCaaG11B.1.4270.00005
ORF7a52N52KaaCaaA11B.1.5250.000113
ORF7a52N52KaaCaaA11B.1.5880.00091
ORF7a52N52KaaCaaA11D.20.000075
ORF7a52N52KaaCaaA11P.10.000016
ORF7a52N52KaaCaaA11Q.80.000165