CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = N52D

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a52N52DnonsynAacGac1911840.96335127547-27549
ORF7a52N52DnonsynAaCGaT19170.036649227547-27549

Details of the mutation N52D within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a52N52DAacGac184191All0.000035
ORF7a52N52DAaCGaT7191All0.000001
ORF7a52N52DAacGac8585B.1.1.70.000076
ORF7a52N52DAacGac2222AY.200.000855
ORF7a52N52DAacGac1616B.1.177.70.002638
ORF7a52N52DAacGac1010AY.1020.000265
ORF7a52N52DAacGac99AY.40.000014
ORF7a52N52DAacGac77AY.390.000173
ORF7a52N52DAacGac47B.1.617.20.000015
ORF7a52N52DAaCGaT37B.1.617.20.000011
ORF7a52N52DAaCGaT35AY.250.000018
ORF7a52N52DAacGac25AY.250.000012
ORF7a52N52DAacGac55AY.440.00003
ORF7a52N52DAacGac33AY.1030.000019
ORF7a52N52DAacGac22AY.1000.000092
ORF7a52N52DAacGac22AY.570.001312
ORF7a52N52DAacGac22AY.770.002255
ORF7a52N52DAacGac12B.1.20.000009
ORF7a52N52DAaCGaT12B.1.20.000009
ORF7a52N52DAacGac11AY.1060.000335
ORF7a52N52DAacGac11AY.1170.000085
ORF7a52N52DAacGac11AY.1180.000063
ORF7a52N52DAacGac11AY.260.000028
ORF7a52N52DAacGac11AY.300.000396
ORF7a52N52DAacGac11AY.330.000067
ORF7a52N52DAacGac11AY.430.000004
ORF7a52N52DAacGac11AY.450.000122
ORF7a52N52DAacGac11AY.60.000041
ORF7a52N52DAacGac11AY.980.000079
ORF7a52N52DAacGac11B.10.000009
ORF7a52N52DAacGac11B.1.1.710.006061
ORF7a52N52DAacGac11B.1.243.20.014493
ORF7a52N52DAacGac11P.10.000016