CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = L96F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a96L96FnonsynCttTtt328332820.99969527679-27681
ORF7a96L96FnonsynCtTTtC328310.00030459927679-27681

Details of the mutation L96F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a96L96FCttTtt32823283All0.000628
ORF7a96L96FCtTTtC13283All0
ORF7a96L96FCttTtt852853B.1.1.70.000763
ORF7a96L96FCtTTtC1853B.1.1.70.000001
ORF7a96L96FCttTtt236236B.1.438.10.025314
ORF7a96L96FCttTtt198198B.1.5960.017253
ORF7a96L96FCttTtt181181B.1.10.003284
ORF7a96L96FCttTtt149149AY.40.000232
ORF7a96L96FCttTtt142142P.1.140.006788
ORF7a96L96FCttTtt137137P.10.002158
ORF7a96L96FCttTtt123123B.1.20.001083
ORF7a96L96FCttTtt8383B.1.1.2700.85567
ORF7a96L96FCttTtt7474B.1.617.20.000279
ORF7a96L96FCttTtt5959B.1.177.210.004512
ORF7a96L96FCttTtt5555B.10.000504
ORF7a96L96FCttTtt5050B.1.4290.001176
ORF7a96L96FCttTtt4949AY.250.000295
ORF7a96L96FCttTtt3939AY.430.000173
ORF7a96L96FCttTtt3333B.1.3510.000981
ORF7a96L96FCttTtt2727AY.290.000426
ORF7a96L96FCttTtt2525AY.1030.000155
ORF7a96L96FCttTtt2525B.1.2580.001664
ORF7a96L96FCttTtt2525B.1.5640.010647
ORF7a96L96FCttTtt2424B.1.177.860.004403
ORF7a96L96FCttTtt2323B.1.1770.000303
ORF7a96L96FCttTtt2323B.1.258.170.002391
ORF7a96L96FCttTtt2121C.360.019126
ORF7a96L96FCttTtt2020AY.440.000122
ORF7a96L96FCttTtt2020B.1.1600.000624
ORF7a96L96FCttTtt1919AY.1020.000504
ORF7a96L96FCttTtt1919B.1.2430.001322
ORF7a96L96FCttTtt1919B.1.6090.009108
ORF7a96L96FCttTtt1818B.1.5820.008832
ORF7a96L96FCttTtt1616P.1.70.005109
ORF7a96L96FCttTtt1515B.1.1.2940.018987
ORF7a96L96FCttTtt1313B.1.1.5190.000516
ORF7a96L96FCttTtt1313P.1.20.015029
ORF7a96L96FCttTtt1212B.1.5260.000282
ORF7a96L96FCttTtt1111AY.750.000616
ORF7a96L96FCttTtt1111B.1.6210.000974
ORF7a96L96FCttTtt1010AY.1000.00046
ORF7a96L96FCttTtt1010AY.390.000247
ORF7a96L96FCttTtt1010B.1.1.10.003267
ORF7a96L96FCttTtt1010B.1.1.4220.454545
ORF7a96L96FCttTtt1010B.1.5750.003034
ORF7a96L96FCttTtt99B.1.1.4340.003137
ORF7a96L96FCttTtt99B.1.1460.038136
ORF7a96L96FCttTtt99B.1.1890.038627
ORF7a96L96FCttTtt99B.1.360.001313
ORF7a96L96FCttTtt88AY.30.00008
ORF7a96L96FCttTtt88AY.9.20.000294
ORF7a96L96FCttTtt77AY.200.000272
ORF7a96L96FCttTtt77AY.39.10.000277
ORF7a96L96FCttTtt77B.1.177.820.003341
ORF7a96L96FCttTtt77B.1.2110.175
ORF7a96L96FCttTtt77B.1.2210.000497
ORF7a96L96FCttTtt77P.20.001306
ORF7a96L96FCttTtt66AY.1200.000223
ORF7a96L96FCttTtt66B.1.1.630.002315
ORF7a96L96FCttTtt66B.1.5610.002382
ORF7a96L96FCttTtt66B.400.002186
ORF7a96L96FCttTtt55AY.130.000805
ORF7a96L96FCttTtt55AY.420.000201
ORF7a96L96FCttTtt55D.20.000375
ORF7a96L96FCttTtt55Q.10.000632
ORF7a96L96FCttTtt55Q.40.002274
ORF7a96L96FCttTtt44AY.1130.00057
ORF7a96L96FCttTtt44AY.260.000113
ORF7a96L96FCttTtt44AY.330.000267
ORF7a96L96FCttTtt44AY.740.000463
ORF7a96L96FCttTtt44AY.90.00027
ORF7a96L96FCttTtt44B.1.1.3170.001647
ORF7a96L96FCttTtt44B.1.1.50.033333
ORF7a96L96FCttTtt44B.1.2340.000528
ORF7a96L96FCttTtt44B.1.4410.038462
ORF7a96L96FCttTtt44B.1.5250.000453
ORF7a96L96FCttTtt44B.1.6370.000292
ORF7a96L96FCttTtt44C.160.004242
ORF7a96L96FCttTtt44C.370.000464
ORF7a96L96FCttTtt33AY.450.000365
ORF7a96L96FCttTtt33AY.470.000093
ORF7a96L96FCttTtt33AY.50.000062
ORF7a96L96FCttTtt33AY.550.002752
ORF7a96L96FCttTtt33AY.60.000123
ORF7a96L96FCttTtt33AY.820.004071
ORF7a96L96FCttTtt33B.1.1.2190.015
ORF7a96L96FCttTtt33B.1.177.40.000633
ORF7a96L96FCttTtt33B.1.36.290.001552
ORF7a96L96FCttTtt33B.1.36.80.003
ORF7a96L96FCttTtt33B.1.466.20.001174
ORF7a96L96FCttTtt33B.1.6040.051724
ORF7a96L96FCttTtt33B.1.6200.002838
ORF7a96L96FCttTtt33P.1.120.001452
ORF7a96L96FCttTtt33P.1.170.000485
ORF7a96L96FCttTtt22AY.1170.000169
ORF7a96L96FCttTtt22AY.1210.000271
ORF7a96L96FCttTtt22AY.29.10.000441
ORF7a96L96FCttTtt22AY.4.50.000215
ORF7a96L96FCttTtt22AY.690.000373
ORF7a96L96FCttTtt22B.1.1.100.00223
ORF7a96L96FCttTtt22B.1.1.2140.000111
ORF7a96L96FCttTtt22B.1.1.2220.000408
ORF7a96L96FCttTtt22B.1.1.280.000622
ORF7a96L96FCttTtt22B.1.1.330.000842
ORF7a96L96FCttTtt22B.1.1.3850.008929
ORF7a96L96FCttTtt22B.1.177.870.001456
ORF7a96L96FCttTtt22B.1.36.190.018519
ORF7a96L96FCttTtt22B.1.36.310.003503
ORF7a96L96FCttTtt22B.1.3960.001411
ORF7a96L96FCttTtt22B.1.4270.000101
ORF7a96L96FCttTtt22B.1.4450.023529
ORF7a96L96FCttTtt22B.1.5600.009259
ORF7a96L96FCttTtt22B.1.5950.000522
ORF7a96L96FCttTtt22B.1.6120.005305
ORF7a96L96FCttTtt22B.1.6280.000705
ORF7a96L96FCttTtt22N.50.003534
ORF7a96L96FCttTtt22P.1.150.000465
ORF7a96L96FCttTtt11A.10.000282
ORF7a96L96FCttTtt11A.23.10.000704
ORF7a96L96FCttTtt11AA.10.007246
ORF7a96L96FCttTtt11AU.30.00211
ORF7a96L96FCttTtt11AY.1160.000287
ORF7a96L96FCttTtt11AY.1190.000035
ORF7a96L96FCttTtt11AY.150.002222
ORF7a96L96FCttTtt11AY.160.00038
ORF7a96L96FCttTtt11AY.230.00007
ORF7a96L96FCttTtt11AY.270.000065
ORF7a96L96FCttTtt11AY.360.000148
ORF7a96L96FCttTtt11AY.370.000316
ORF7a96L96FCttTtt11AY.4.20.000022
ORF7a96L96FCttTtt11AY.46.60.000072
ORF7a96L96FCttTtt11AY.520.000814
ORF7a96L96FCttTtt11AY.540.000095
ORF7a96L96FCttTtt11AY.590.00053
ORF7a96L96FCttTtt11AY.650.000533
ORF7a96L96FCttTtt11AY.860.00083
ORF7a96L96FCttTtt11AY.960.002075
ORF7a96L96FCttTtt11AY.980.000079
ORF7a96L96FCttTtt11AY.99.20.000092
ORF7a96L96FCttTtt11AZ.10.000867
ORF7a96L96FCttTtt11B0.000128
ORF7a96L96FCttTtt11B.1.1.1210.002427
ORF7a96L96FCttTtt11B.1.1.1890.001513
ORF7a96L96FCttTtt11B.1.1.1910.004762
ORF7a96L96FCttTtt11B.1.1.2070.001182
ORF7a96L96FCttTtt11B.1.1.2160.00089
ORF7a96L96FCttTtt11B.1.1.270.00565
ORF7a96L96FCttTtt11B.1.1.2980.000862
ORF7a96L96FCttTtt11B.1.1.3030.002762
ORF7a96L96FCttTtt11B.1.1.3060.000438
ORF7a96L96FCttTtt11B.1.1.3150.008475
ORF7a96L96FCttTtt11B.1.1.3330.001076
ORF7a96L96FCttTtt11B.1.1.3350.012987
ORF7a96L96FCttTtt11B.1.1.3710.010417
ORF7a96L96FCttTtt11B.1.1.3720.000689
ORF7a96L96FCttTtt11B.1.1.4090.002833
ORF7a96L96FCttTtt11B.1.1.4320.001266
ORF7a96L96FCttTtt11B.1.1.540.003021
ORF7a96L96FCttTtt11B.1.1.740.00431
ORF7a96L96FCttTtt11B.1.1.80.003584
ORF7a96L96FCttTtt11B.1.1280.000635
ORF7a96L96FCttTtt11B.1.1580.02381
ORF7a96L96FCttTtt11B.1.177.200.001517
ORF7a96L96FCttTtt11B.1.177.510.004566
ORF7a96L96FCttTtt11B.1.177.550.002331
ORF7a96L96FCttTtt11B.1.177.570.000281
ORF7a96L96FCttTtt11B.1.177.630.002703
ORF7a96L96FCttTtt11B.1.177.70.000165
ORF7a96L96FCttTtt11B.1.177.750.001041
ORF7a96L96FCttTtt11B.1.177.770.000726
ORF7a96L96FCttTtt11B.1.177.90.001332
ORF7a96L96FCttTtt11B.1.1810.019608
ORF7a96L96FCttTtt11B.1.1880.016667
ORF7a96L96FCttTtt11B.1.2100.002132
ORF7a96L96FCttTtt11B.1.2320.000537
ORF7a96L96FCttTtt11B.1.2360.002053
ORF7a96L96FCttTtt11B.1.30.002618
ORF7a96L96FCttTtt11B.1.3110.000275
ORF7a96L96FCttTtt11B.1.3150.006061
ORF7a96L96FCttTtt11B.1.3500.002933
ORF7a96L96FCttTtt11B.1.36.10.00114
ORF7a96L96FCttTtt11B.1.36.170.000494
ORF7a96L96FCttTtt11B.1.36.180.00042
ORF7a96L96FCttTtt11B.1.36.220.001208
ORF7a96L96FCttTtt11B.1.36.260.002857
ORF7a96L96FCttTtt11B.1.3690.000285
ORF7a96L96FCttTtt11B.1.4000.000429
ORF7a96L96FCttTtt11B.1.4700.001404
ORF7a96L96FCttTtt11B.1.5170.000427
ORF7a96L96FCttTtt11B.1.5410.004425
ORF7a96L96FCttTtt11B.1.5460.003704
ORF7a96L96FCttTtt11B.1.5670.003333
ORF7a96L96FCttTtt11B.1.5760.000907
ORF7a96L96FCttTtt11B.1.5900.004545
ORF7a96L96FCttTtt11B.1.617.10.000129
ORF7a96L96FCttTtt11C.180.002591
ORF7a96L96FCttTtt11C.300.001727
ORF7a96L96FCttTtt11C.40.01
ORF7a96L96FCttTtt11P.1.10.000318
ORF7a96L96FCttTtt11P.1.100.000269
ORF7a96L96FCttTtt11P.1.50.076923
ORF7a96L96FCttTtt11Q.70.001111
ORF7a96L96FCttTtt11Q.80.000165
ORF7a96L96FCttTtt11W.10.008696