CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = L5V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a5L5VnonsynCttGtt1451420.9793127406-27408
ORF7a5L5VnonsynCtTGtC14520.013793127406-27408
ORF7a5L5VnonsynCtTGtA14510.0068965527406-27408

Details of the mutation L5V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a5L5VCttGtt142145All0.000027
ORF7a5L5VCtTGtC2145All0
ORF7a5L5VCtTGtA1145All0
ORF7a5L5VCttGtt5859B.1.1.70.000052
ORF7a5L5VCtTGtA159B.1.1.70.000001
ORF7a5L5VCttGtt1919AY.230.001325
ORF7a5L5VCttGtt88B.1.2580.000532
ORF7a5L5VCttGtt88B.1.5250.000905
ORF7a5L5VCttGtt77B.1.4290.000165
ORF7a5L5VCttGtt66AY.390.000148
ORF7a5L5VCttGtt24AY.40.000003
ORF7a5L5VCtTGtC24AY.40.000003
ORF7a5L5VCttGtt44AY.430.000018
ORF7a5L5VCttGtt44B.1.20.000035
ORF7a5L5VCttGtt33B.1.4270.000151
ORF7a5L5VCttGtt220.111111
ORF7a5L5VCttGtt22AY.1190.000071
ORF7a5L5VCttGtt22AY.940.000885
ORF7a5L5VCttGtt22B.1.5960.000174
ORF7a5L5VCttGtt22P.1.170.000324
ORF7a5L5VCttGtt11AY.120.20.001285
ORF7a5L5VCttGtt11AY.250.000006
ORF7a5L5VCttGtt11AY.380.000499
ORF7a5L5VCttGtt11AY.420.00004
ORF7a5L5VCttGtt11AY.60.000041
ORF7a5L5VCttGtt11AY.740.000116
ORF7a5L5VCttGtt11B.1.1770.000013
ORF7a5L5VCttGtt11B.1.3110.000275
ORF7a5L5VCttGtt11B.1.3960.000706
ORF7a5L5VCttGtt11B.1.6210.000089
ORF7a5L5VCttGtt11B.1.6360.006711
ORF7a5L5VCttGtt11C.140.004329
ORF7a5L5VCttGtt11P.10.000016