CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = L5S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a5L5SnonsynCTtTCt12100.83333327406-27408
ORF7a5L5SnonsynCTtAGt1220.16666727406-27408

Details of the mutation L5S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a5L5SCTtTCt1012All0.000002
ORF7a5L5SCTtAGt212All0
ORF7a5L5SCTtTCt77AY.40.000011
ORF7a5L5SCTtAGt220.111111
ORF7a5L5SCTtTCt22AY.440.000012
ORF7a5L5SCTtTCt11B.1.1.70.000001