CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = L56del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a56L56deldelCTG---2650726507127559-27561

Details of the mutation L56del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a56L56delCTG---2650726507All0.00507
ORF7a56L56delCTG---1157411574AY.40.018014
ORF7a56L56delCTG---26902690B.1.617.20.010129
ORF7a56L56delCTG---17731773B.1.1.70.001587
ORF7a56L56delCTG---16651665AY.120.10.53451
ORF7a56L56delCTG---14861486AY.250.008938
ORF7a56L56delCTG---841841AY.430.003726
ORF7a56L56delCTG---513513AY.1030.003185
ORF7a56L56delCTG---429429AY.260.012145
ORF7a56L56delCTG---414414AY.30.004118
ORF7a56L56delCTG---372372AY.390.009193
ORF7a56L56delCTG---371371AY.440.002258
ORF7a56L56delCTG---309309AY.1020.008193
ORF7a56L56delCTG---251251AY.290.003959
ORF7a56L56delCTG---196196B.1.3510.005826
ORF7a56L56delCTG---180180AY.1200.006692
ORF7a56L56delCTG---180180B.1.177.210.013765
ORF7a56L56delCTG---165165AY.4.20.003579
ORF7a56L56delCTG---109109AY.470.00339
ORF7a56L56delCTG---108108AY.1190.003813
ORF7a56L56delCTG---107107AY.7.10.012059
ORF7a56L56delCTG---103103AY.1000.004739
ORF7a56L56delCTG---8686B.1.1770.001132
ORF7a56L56delCTG---8080AY.46.40.01316
ORF7a56L56delCTG---6969AY.50.001425
ORF7a56L56delCTG---6565AY.46.60.004693
ORF7a56L56delCTG---6464B.1.20.000564
ORF7a56L56delCTG---5959AY.420.002374
ORF7a56L56delCTG---5858AY.3.10.004945
ORF7a56L56delCTG---5757AY.330.003806
ORF7a56L56delCTG---5757B.10.000522
ORF7a56L56delCTG---5454AY.39.10.002139
ORF7a56L56delCTG---5454AY.60.002221
ORF7a56L56delCTG---5252AY.1130.007404
ORF7a56L56delCTG---5252AY.230.003627
ORF7a56L56delCTG---5252AY.750.002913
ORF7a56L56delCTG---5151AY.450.006206
ORF7a56L56delCTG---4848AY.460.004996
ORF7a56L56delCTG---4747AY.200.001827
ORF7a56L56delCTG---4747B.1.5260.001105
ORF7a56L56delCTG---4545AY.1070.020969
ORF7a56L56delCTG---4545B.1.1.2840.004833
ORF7a56L56delCTG---4545B.1.6210.003983
ORF7a56L56delCTG---4444AY.130.007083
ORF7a56L56delCTG---4242AY.540.004005
ORF7a56L56delCTG---3939AY.980.003081
ORF7a56L56delCTG---3939P.10.000614
ORF7a56L56delCTG---3838AY.1100.004282
ORF7a56L56delCTG---3636AY.98.10.001744
ORF7a56L56delCTG---3535AY.1180.002193
ORF7a56L56delCTG---3131AY.340.003006
ORF7a56L56delCTG---3030AY.90.002028
ORF7a56L56delCTG---2828AY.600.026266
ORF7a56L56delCTG---2828B.1.10.000508
ORF7a56L56delCTG---2727AY.70.005292
ORF7a56L56delCTG---2525AY.1170.002113
ORF7a56L56delCTG---2525AY.190.028506
ORF7a56L56delCTG---2525B.1.1.2140.001386
ORF7a56L56delCTG---2424AY.7.20.013423
ORF7a56L56delCTG---2424AY.9.10.002009
ORF7a56L56delCTG---2323AY.300.009102
ORF7a56L56delCTG---2020AY.1210.002706
ORF7a56L56delCTG---1818AY.1060.006028
ORF7a56L56delCTG---1818AY.9.20.000661
ORF7a56L56delCTG---1818AY.99.20.001659
ORF7a56L56delCTG---1818B.1.6370.001315
ORF7a56L56delCTG---1717AY.740.001966
ORF7a56L56delCTG---1616AY.10.006332
ORF7a56L56delCTG---1616AY.4.50.00172
ORF7a56L56delCTG---1616R.10.00144
ORF7a56L56delCTG---1515AY.360.002223
ORF7a56L56delCTG---1515B.1.1.2220.00306
ORF7a56L56delCTG---1515B.1.4290.000353
ORF7a56L56delCTG---1515B.1.5960.001307
ORF7a56L56delCTG---1515C.370.001741
ORF7a56L56delCTG---1414AY.1110.002564
ORF7a56L56delCTG---1414AY.1160.004015
ORF7a56L56delCTG---1414AY.46.20.008895
ORF7a56L56delCTG---1414AY.610.001467
ORF7a56L56delCTG---1414B.1.1.2580.045603
ORF7a56L56delCTG---1414B.1.1600.000437
ORF7a56L56delCTG---1313AY.1140.003004
ORF7a56L56delCTG---1313AY.680.003559
ORF7a56L56delCTG---1212AY.140.001056
ORF7a56L56delCTG---1212AY.370.003793
ORF7a56L56delCTG---1212B.1.2430.000835
ORF7a56L56delCTG---1212B.1.3240.019262
ORF7a56L56delCTG---1111AY.990.011542
ORF7a56L56delCTG---1010AY.120.003161
ORF7a56L56delCTG---1010AY.350.00233
ORF7a56L56delCTG---1010AY.4.2.10.00149
ORF7a56L56delCTG---1010AY.840.004374
ORF7a56L56delCTG---1010AY.870.008326
ORF7a56L56delCTG---1010B.1.4270.000505
ORF7a56L56delCTG---1010B.1.5250.001132
ORF7a56L56delCTG---99AY.1090.006657
ORF7a56L56delCTG---99B.1.258.90.045
ORF7a56L56delCTG---99L.10.017143
ORF7a56L56delCTG---88AY.270.000518
ORF7a56L56delCTG---88AY.29.10.001764
ORF7a56L56delCTG---88AY.620.003486
ORF7a56L56delCTG---88B.1.1.2310.024768
ORF7a56L56delCTG---88Q.80.001319
ORF7a56L56delCTG---77AY.710.003325
ORF7a56L56delCTG---77AY.850.00299
ORF7a56L56delCTG---77B.1.1.5190.000278
ORF7a56L56delCTG---77P.1.150.001626
ORF7a56L56delCTG---66AY.100.00318
ORF7a56L56delCTG---66AY.46.10.00616
ORF7a56L56delCTG---66AY.650.003198
ORF7a56L56delCTG---66AY.900.004107
ORF7a56L56delCTG---66AY.910.004383
ORF7a56L56delCTG---66AY.920.001724
ORF7a56L56delCTG---66B.1.3750.004918
ORF7a56L56delCTG---66Q.10.000758
ORF7a56L56delCTG---55AY.160.001898
ORF7a56L56delCTG---55AY.4.40.002046
ORF7a56L56delCTG---55AY.46.50.000992
ORF7a56L56delCTG---55AY.480.002326
ORF7a56L56delCTG---55AY.520.004072
ORF7a56L56delCTG---55AY.660.005348
ORF7a56L56delCTG---55AY.690.000933
ORF7a56L56delCTG---55AY.800.005643
ORF7a56L56delCTG---55AY.950.003805
ORF7a56L56delCTG---55B.1.1.560.089286
ORF7a56L56delCTG---55B.1.700.121951
ORF7a56L56delCTG---55P.1.140.000239
ORF7a56L56delCTG---55P.20.000933
ORF7a56L56delCTG---44A0.001548
ORF7a56L56delCTG---44AY.590.002119
ORF7a56L56delCTG---44AY.730.002661
ORF7a56L56delCTG---44B.1.214.20.002398
ORF7a56L56delCTG---44B.1.2340.000528
ORF7a56L56delCTG---44D.20.0003
ORF7a56L56delCTG---33AY.240.001293
ORF7a56L56delCTG---33AY.34.10.00153
ORF7a56L56delCTG---33AY.4.30.002525
ORF7a56L56delCTG---33AY.400.002893
ORF7a56L56delCTG---33AY.410.000882
ORF7a56L56delCTG---33AY.5.30.001012
ORF7a56L56delCTG---33AY.530.000863
ORF7a56L56delCTG---33AY.75.10.000541
ORF7a56L56delCTG---33AY.860.00249
ORF7a56L56delCTG---33AY.880.002653
ORF7a56L56delCTG---33AY.930.000819
ORF7a56L56delCTG---33B.1.1.1210.007282
ORF7a56L56delCTG---33B.1.1.3180.000905
ORF7a56L56delCTG---33B.1.160.160.002788
ORF7a56L56delCTG---33B.1.177.60.00293
ORF7a56L56delCTG---33B.1.177.600.000655
ORF7a56L56delCTG---33B.1.360.000438
ORF7a56L56delCTG---33B.1.5750.00091
ORF7a56L56delCTG---33B.1.5820.001472
ORF7a56L56delCTG---33B.1.6260.017143
ORF7a56L56delCTG---33P.1.160.001122
ORF7a56L56delCTG---22A.280.005291
ORF7a56L56delCTG---22AY.1010.000981
ORF7a56L56delCTG---22AY.1080.002205
ORF7a56L56delCTG---22AY.116.10.000623
ORF7a56L56delCTG---22AY.120.20.002571
ORF7a56L56delCTG---22AY.120.2.10.000997
ORF7a56L56delCTG---22AY.20.000712
ORF7a56L56delCTG---22AY.220.004184
ORF7a56L56delCTG---22AY.490.00639
ORF7a56L56delCTG---22AY.510.001818
ORF7a56L56delCTG---22AY.570.001312
ORF7a56L56delCTG---22AY.700.000417
ORF7a56L56delCTG---22AY.790.002421
ORF7a56L56delCTG---22AY.80.001212
ORF7a56L56delCTG---22B.1.1.10.000653
ORF7a56L56delCTG---22B.1.1.2200.003717
ORF7a56L56delCTG---22B.1.1.250.001137
ORF7a56L56delCTG---22B.1.1.370.000386
ORF7a56L56delCTG---22B.1.1.3720.001377
ORF7a56L56delCTG---22B.1.1.5210.010695
ORF7a56L56delCTG---22B.1.177.160.001329
ORF7a56L56delCTG---22B.1.177.430.002954
ORF7a56L56delCTG---22B.1.177.550.004662
ORF7a56L56delCTG---22B.1.177.810.000379
ORF7a56L56delCTG---22B.1.177.860.000367
ORF7a56L56delCTG---22B.1.2210.000142
ORF7a56L56delCTG---22B.1.2580.000133
ORF7a56L56delCTG---22B.1.258.110.000793
ORF7a56L56delCTG---22B.1.3110.000549
ORF7a56L56delCTG---22B.1.351.20.000605
ORF7a56L56delCTG---22B.1.416.10.003125
ORF7a56L56delCTG---22B.1.4700.002809
ORF7a56L56delCTG---22B.1.617.10.000258
ORF7a56L56delCTG---22B.1.617.30.00597
ORF7a56L56delCTG---22B.1.621.10.001012
ORF7a56L56delCTG---22C.36.30.001134
ORF7a56L56delCTG---22P.1.17.10.00175
ORF7a56L56delCTG---22P.1.20.002312
ORF7a56L56delCTG---11A.10.000282
ORF7a56L56delCTG---11A.2.5.30.010309
ORF7a56L56delCTG---11A.23.10.000704
ORF7a56L56delCTG---11AD.20.000219
ORF7a56L56delCTG---11AU.30.00211
ORF7a56L56delCTG---11AY.1040.001984
ORF7a56L56delCTG---11AY.1050.000643
ORF7a56L56delCTG---11AY.110.001339
ORF7a56L56delCTG---11AY.320.000532
ORF7a56L56delCTG---11AY.380.000499
ORF7a56L56delCTG---11AY.39.20.001541
ORF7a56L56delCTG---11AY.5.40.000277
ORF7a56L56delCTG---11AY.640.000595
ORF7a56L56delCTG---11AY.720.001361
ORF7a56L56delCTG---11AY.810.001992
ORF7a56L56delCTG---11AY.890.004902
ORF7a56L56delCTG---11AY.940.000443
ORF7a56L56delCTG---11AY.960.002075
ORF7a56L56delCTG---11AZ.20.000821
ORF7a56L56delCTG---11B0.000128
ORF7a56L56delCTG---11B.1.1.1570.000913
ORF7a56L56delCTG---11B.1.1.1740.003378
ORF7a56L56delCTG---11B.1.1.1920.002309
ORF7a56L56delCTG---11B.1.1.1940.00495
ORF7a56L56delCTG---11B.1.1.2050.003717
ORF7a56L56delCTG---11B.1.1.2070.001182
ORF7a56L56delCTG---11B.1.1.2090.008929
ORF7a56L56delCTG---11B.1.1.2400.004695
ORF7a56L56delCTG---11B.1.1.2410.00207
ORF7a56L56delCTG---11B.1.1.2770.000759
ORF7a56L56delCTG---11B.1.1.2980.000862
ORF7a56L56delCTG---11B.1.1.3030.002762
ORF7a56L56delCTG---11B.1.1.330.000421
ORF7a56L56delCTG---11B.1.1.3480.000796
ORF7a56L56delCTG---11B.1.1.3660.015873
ORF7a56L56delCTG---11B.1.1.4320.001266
ORF7a56L56delCTG---11B.1.1.4370.010417
ORF7a56L56delCTG---11B.1.1.5250.005464
ORF7a56L56delCTG---11B.1.1.700.000341
ORF7a56L56delCTG---11B.1.1150.021739
ORF7a56L56delCTG---11B.1.1400.018868
ORF7a56L56delCTG---11B.1.177.100.000878
ORF7a56L56delCTG---11B.1.177.50.001242
ORF7a56L56delCTG---11B.1.177.500.004695
ORF7a56L56delCTG---11B.1.177.530.002392
ORF7a56L56delCTG---11B.1.177.570.000281
ORF7a56L56delCTG---11B.1.177.620.001192
ORF7a56L56delCTG---11B.1.177.630.002703
ORF7a56L56delCTG---11B.1.177.830.001481
ORF7a56L56delCTG---11B.1.2360.002053
ORF7a56L56delCTG---11B.1.2400.000216
ORF7a56L56delCTG---11B.1.258.170.000104
ORF7a56L56delCTG---11B.1.2650.001271
ORF7a56L56delCTG---11B.1.351.30.000876
ORF7a56L56delCTG---11B.1.3560.001727
ORF7a56L56delCTG---11B.1.36.350.002604
ORF7a56L56delCTG---11B.1.3710.001122
ORF7a56L56delCTG---11B.1.4010.008197
ORF7a56L56delCTG---11B.1.4060.006061
ORF7a56L56delCTG---11B.1.438.10.000107
ORF7a56L56delCTG---11B.1.4590.004082
ORF7a56L56delCTG---11B.1.466.20.000391
ORF7a56L56delCTG---11B.1.4680.005714
ORF7a56L56delCTG---11B.1.5350.028571
ORF7a56L56delCTG---11B.1.5650.00081
ORF7a56L56delCTG---11B.1.5680.001111
ORF7a56L56delCTG---11B.1.5760.000907
ORF7a56L56delCTG---11B.1.5950.000261
ORF7a56L56delCTG---11B.1.6380.052632
ORF7a56L56delCTG---11B.1.9.10.032258
ORF7a56L56delCTG---11B.110.005128
ORF7a56L56delCTG---11B.390.002331
ORF7a56L56delCTG---11K.30.006173
ORF7a56L56delCTG---11P.1.10.000318
ORF7a56L56delCTG---11P.1.130.000898
ORF7a56L56delCTG---11P.1.170.000162
ORF7a56L56delCTG---11P.1.30.034483
ORF7a56L56delCTG---11P.1.40.000977
ORF7a56L56delCTG---11Q.70.001111