CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = L56S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a56L56SnonsynCTGTCA830.37527559-27561
ORF7a56L56SnonsynCTGTCT830.37527559-27561
ORF7a56L56SnonsynCTGTCC810.12527559-27561
ORF7a56L56SnonsynCTgTCg810.12527559-27561

Details of the mutation L56S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a56L56SCTGTCA38All0.000001
ORF7a56L56SCTGTCT38All0.000001
ORF7a56L56SCTGTCC18All0
ORF7a56L56SCTgTCg18All0
ORF7a56L56SCTGTCT24AY.250.000012
ORF7a56L56SCTGTCA14AY.250.000006
ORF7a56L56SCTGTCC14AY.250.000006
ORF7a56L56SCTGTCA13B.1.3510.00003
ORF7a56L56SCTgTCg13B.1.3510.00003
ORF7a56L56SCTGTCT13B.1.3510.00003
ORF7a56L56SCTGTCA11B.1.177.210.000076