CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = L56R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a56L56RnonsyncTgcGg29240.82758627559-27561
ORF7a56L56RnonsynCTGAGA2930.10344827559-27561
ORF7a56L56RnonsyncTGcGA2920.068965527559-27561

Details of the mutation L56R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a56L56RcTgcGg2429All0.000005
ORF7a56L56RCTGAGA329All0.000001
ORF7a56L56RcTGcGA229All0
ORF7a56L56RcTgcGg1213B.1.1.70.000011
ORF7a56L56RcTGcGA113B.1.1.70.000001
ORF7a56L56RcTgcGg88B.1.1770.000105
ORF7a56L56RcTgcGg12AY.540.000095
ORF7a56L56RCTGAGA12AY.540.000095
ORF7a56L56RcTgcGg11AY.330.000067
ORF7a56L56RcTgcGg11AY.740.000116
ORF7a56L56RcTGcGA11AY.790.001211
ORF7a56L56RcTgcGg11B.1.1600.000031
ORF7a56L56RCTGAGA11B.1.3510.00003
ORF7a56L56RCTGAGA11B.1.617.20.000004