CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = L56Q

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a56L56QnonsyncTgcAg1271190.93700827559-27561
ORF7a56L56QnonsyncTGcAA12780.062992127559-27561

Details of the mutation L56Q within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a56L56QcTgcAg119127All0.000023
ORF7a56L56QcTGcAA8127All0.000002
ORF7a56L56QcTgcAg3637B.1.1.70.000032
ORF7a56L56QcTGcAA137B.1.1.70.000001
ORF7a56L56QcTgcAg3030AY.520.02443
ORF7a56L56QcTgcAg811B.1.3510.000238
ORF7a56L56QcTGcAA311B.1.3510.000089
ORF7a56L56QcTgcAg1011B.1.617.20.000038
ORF7a56L56QcTGcAA111B.1.617.20.000004
ORF7a56L56QcTgcAg55AY.40.000008
ORF7a56L56QcTgcAg55AY.470.000156
ORF7a56L56QcTGcAA240.111111
ORF7a56L56QcTgcAg240.111111
ORF7a56L56QcTgcAg33B.1.5950.000783
ORF7a56L56QcTgcAg22AY.200.000078
ORF7a56L56QcTGcAA12AY.250.000006
ORF7a56L56QcTgcAg12AY.250.000006
ORF7a56L56QcTgcAg22B.10.000018
ORF7a56L56QcTgcAg22B.1.1.1760.000879
ORF7a56L56QcTgcAg11AY.230.00007
ORF7a56L56QcTgcAg11AY.30.00001
ORF7a56L56QcTgcAg11AY.330.000067
ORF7a56L56QcTgcAg11AY.920.000287
ORF7a56L56QcTgcAg11AY.99.20.000092
ORF7a56L56QcTgcAg11B.1.1.5190.00004
ORF7a56L56QcTgcAg11B.1.1.830.00271
ORF7a56L56QcTgcAg11B.1.110.30.000718
ORF7a56L56QcTgcAg11B.1.1490.003425
ORF7a56L56QcTgcAg11B.1.4290.000024
ORF7a56L56QcTgcAg11B.1.4950.009091
ORF7a56L56QcTgcAg11B.1.5880.00091
ORF7a56L56QcTgcAg11B.400.000364