CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = L56P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a56L56PnonsyncTgcCg2272190.96475827559-27561
ORF7a56L56PnonsyncTGcCA22740.017621127559-27561
ORF7a56L56PnonsyncTGcCC22720.0088105727559-27561
ORF7a56L56PnonsyncTGcCT22720.0088105727559-27561

Details of the mutation L56P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a56L56PcTgcCg219227All0.000042
ORF7a56L56PcTGcCA4227All0.000001
ORF7a56L56PcTGcCT2227All0
ORF7a56L56PcTGcCC2227All0
ORF7a56L56PcTgcCg6969B.1.617.20.00026
ORF7a56L56PcTgcCg3739B.1.1.70.000033
ORF7a56L56PcTGcCA139B.1.1.70.000001
ORF7a56L56PcTGcCC139B.1.1.70.000001
ORF7a56L56PcTgcCg1617AY.40.000025
ORF7a56L56PcTGcCA117AY.40.000002
ORF7a56L56PcTgcCg1515AY.200.000583
ORF7a56L56PcTgcCg1212AY.1030.000075
ORF7a56L56PcTgcCg77AY.430.000031
ORF7a56L56PcTgcCg66B.1.160.70.012474
ORF7a56L56PcTgcCg66C.370.000696
ORF7a56L56PcTgcCg44AY.570.002625
ORF7a56L56PcTgcCg33AY.230.000209
ORF7a56L56PcTgcCg33AY.440.000018
ORF7a56L56PcTgcCg33B.10.000027
ORF7a56L56PcTgcCg13B.1.3510.00003
ORF7a56L56PcTGcCT13B.1.3510.00003
ORF7a56L56PcTGcCA13B.1.3510.00003
ORF7a56L56PcTgcCg23B.1.5260.000047
ORF7a56L56PcTGcCC13B.1.5260.000024
ORF7a56L56PcTgcCg33P.10.000047
ORF7a56L56PcTgcCg22AY.280.003781
ORF7a56L56PcTGcCT12AY.390.000025
ORF7a56L56PcTgcCg12AY.390.000025
ORF7a56L56PcTgcCg22B.1.10.000036
ORF7a56L56PcTgcCg22B.1.177.860.000367
ORF7a56L56PcTgcCg11AY.1020.000027
ORF7a56L56PcTgcCg11AY.1140.000231
ORF7a56L56PcTGcCA11AY.116.10.000311
ORF7a56L56PcTgcCg11AY.1170.000085
ORF7a56L56PcTgcCg11AY.1190.000035
ORF7a56L56PcTgcCg11AY.160.00038
ORF7a56L56PcTgcCg11AY.250.000006
ORF7a56L56PcTgcCg11AY.290.000016
ORF7a56L56PcTgcCg11AY.46.40.000165
ORF7a56L56PcTgcCg11AY.470.000031
ORF7a56L56PcTgcCg11AY.50.000021
ORF7a56L56PcTgcCg11AY.5.40.000277
ORF7a56L56PcTgcCg11AY.610.000105
ORF7a56L56PcTgcCg11AY.710.000475
ORF7a56L56PcTgcCg11AY.90.000068
ORF7a56L56PcTgcCg11AY.980.000079
ORF7a56L56PcTgcCg11B0.000128
ORF7a56L56PcTgcCg11B.1.1.2280.003049
ORF7a56L56PcTgcCg11B.1.1.3840.02381
ORF7a56L56PcTgcCg11B.1.1570.002985
ORF7a56L56PcTgcCg11B.1.177.230.003236
ORF7a56L56PcTgcCg11B.1.20.000009
ORF7a56L56PcTgcCg11B.1.36.160.001425
ORF7a56L56PcTgcCg11B.1.4330.003195
ORF7a56L56PcTgcCg11B.1.617.10.000129
ORF7a56L56PcTgcCg11B.1.6210.000089