CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = L56I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a56L56InonsynCtGAtA24130.54166727559-27561
ORF7a56L56InonsynCtGAtT2470.29166727559-27561
ORF7a56L56InonsynCtGAtC2440.16666727559-27561

Details of the mutation L56I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a56L56ICtGAtA1324All0.000002
ORF7a56L56ICtGAtT724All0.000001
ORF7a56L56ICtGAtC424All0.000001
ORF7a56L56ICtGAtA513AY.250.00003
ORF7a56L56ICtGAtT513AY.250.00003
ORF7a56L56ICtGAtC313AY.250.000018
ORF7a56L56ICtGAtA67B.1.617.20.000023
ORF7a56L56ICtGAtC17B.1.617.20.000004
ORF7a56L56ICtGAtT12B.1.177.210.000076
ORF7a56L56ICtGAtA12B.1.177.210.000076
ORF7a56L56ICtGAtA12B.1.3510.00003
ORF7a56L56ICtGAtT12B.1.3510.00003