CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = L56F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a56L56FnonsynCtGTtT33280.84848527559-27561
ORF7a56L56FnonsynCtGTtC3350.15151527559-27561

Details of the mutation L56F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a56L56FCtGTtT2833All0.000005
ORF7a56L56FCtGTtC533All0.000001
ORF7a56L56FCtGTtT1111B.1.1.5190.000437
ORF7a56L56FCtGTtT46AY.250.000024
ORF7a56L56FCtGTtC26AY.250.000012
ORF7a56L56FCtGTtT33B.1.617.20.000011
ORF7a56L56FCtGTtC12AY.40.000002
ORF7a56L56FCtGTtT12AY.40.000002
ORF7a56L56FCtGTtT12B.1.3510.00003
ORF7a56L56FCtGTtC12B.1.3510.00003
ORF7a56L56FCtGTtT22B.1.36.310.003503
ORF7a56L56FCtGTtC11AY.10.000396
ORF7a56L56FCtGTtT11AY.260.000028
ORF7a56L56FCtGTtT11AY.440.000006
ORF7a56L56FCtGTtT11AY.690.000187
ORF7a56L56FCtGTtT11B.1.1.2430.004082
ORF7a56L56FCtGTtT11B.1.5250.000113
ORF7a56L56FCtGTtT11N.40.004255