CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = L49R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a49L49RnonsyncTacGa25110.4427538-27540
ORF7a49L49RnonsynCTaAGa25100.427538-27540
ORF7a49L49RnonsyncTAcGG2520.0827538-27540
ORF7a49L49RnonsynCTAAGG2510.0427538-27540
ORF7a49L49RnonsyncTAcGT2510.0427538-27540

Details of the mutation L49R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a49L49RcTacGa1125All0.000002
ORF7a49L49RCTaAGa1025All0.000002
ORF7a49L49RcTAcGG225All0
ORF7a49L49RCTAAGG125All0
ORF7a49L49RcTAcGT125All0
ORF7a49L49RCTaAGa815B.1.617.20.00003
ORF7a49L49RcTacGa515B.1.617.20.000019
ORF7a49L49RcTAcGG115B.1.617.20.000004
ORF7a49L49RCTAAGG115B.1.617.20.000004
ORF7a49L49RCTaAGa24AY.250.000012
ORF7a49L49RcTAcGT14AY.250.000006
ORF7a49L49RcTacGa14AY.250.000006
ORF7a49L49RcTacGa33B.10.000027
ORF7a49L49RcTacGa11AY.4.20.000022
ORF7a49L49RcTAcGG11AY.430.000004
ORF7a49L49RcTacGa11B.1.6370.000073