CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = L116F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a116L116FnonsynCtcTtc75715756700.99940627739-27741
ORF7a116L116FnonsynCtCTtT75715450.00059433427739-27741

Details of the mutation L116F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a116L116FCtcTtc7567075715All0.014473
ORF7a116L116FCtCTtT4575715All0.000009
ORF7a116L116FCtcTtc1786517875B.1.617.20.067269
ORF7a116L116FCtCTtT1017875B.1.617.20.000038
ORF7a116L116FCtcTtc1244512456B.1.5260.292514
ORF7a116L116FCtCTtT1112456B.1.5260.000259
ORF7a116L116FCtcTtc1072010722AY.140.943496
ORF7a116L116FCtCTtT210722AY.140.000176
ORF7a116L116FCtcTtc92449253AY.540.881388
ORF7a116L116FCtCTtT99253AY.540.000858
ORF7a116L116FCtcTtc52485249AY.130.844816
ORF7a116L116FCtCTtT15249AY.130.000161
ORF7a116L116FCtcTtc30453045AY.530.875503
ORF7a116L116FCtcTtc23922394AY.300.946577
ORF7a116L116FCtCTtT22394AY.300.000791
ORF7a116L116FCtcTtc21652166AY.160.821944
ORF7a116L116FCtCTtT12166AY.160.00038
ORF7a116L116FCtcTtc16031604AY.80.971515
ORF7a116L116FCtCTtT11604AY.80.000606
ORF7a116L116FCtcTtc11631163AY.500.929656
ORF7a116L116FCtcTtc10221022AY.510.929091
ORF7a116L116FCtcTtc780781B.1.1.70.000698
ORF7a116L116FCtCTtT1781B.1.1.70.000001
ORF7a116L116FCtcTtc743743AY.400.71649
ORF7a116L116FCtcTtc701701AY.520.570847
ORF7a116L116FCtcTtc473473AY.16.10.222274
ORF7a116L116FCtcTtc440441AY.150.977778
ORF7a116L116FCtCTtT1441AY.150.002222
ORF7a116L116FCtcTtc383383AY.440.002331
ORF7a116L116FCtcTtc311311AY.430.001378
ORF7a116L116FCtcTtc251251AY.190.286203
ORF7a116L116FCtcTtc223225AY.260.006313
ORF7a116L116FCtCTtT2225AY.260.000057
ORF7a116L116FCtcTtc224224AY.490.715655
ORF7a116L116FCtcTtc198198AY.30.001969
ORF7a116L116FCtcTtc197197AY.40.000307
ORF7a116L116FCtcTtc170170AY.480.07907
ORF7a116L116FCtcTtc169169B.10.001548
ORF7a116L116FCtcTtc140140B.1.1600.004366
ORF7a116L116FCtcTtc133133AY.380.0664
ORF7a116L116FCtcTtc126126AY.290.001987
ORF7a116L116FCtcTtc119119AY.620.051852
ORF7a116L116FCtcTtc117118B.1.20.00103
ORF7a116L116FCtCTtT1118B.1.20.000009
ORF7a116L116FCtcTtc107107B.1.1.3170.044051
ORF7a116L116FCtcTtc9898AY.180.989899
ORF7a116L116FCtcTtc9595AY.980.007505
ORF7a116L116FCtcTtc8989AY.550.081651
ORF7a116L116FCtcTtc8787AY.170.713115
ORF7a116L116FCtcTtc8282AY.250.000493
ORF7a116L116FCtcTtc8282AY.670.038069
ORF7a116L116FCtcTtc7979B.1.1770.00104
ORF7a116L116FCtcTtc7777AY.750.004314
ORF7a116L116FCtcTtc7070AY.1020.001856
ORF7a116L116FCtcTtc6666AY.1030.00041
ORF7a116L116FCtcTtc5252AY.310.962963
ORF7a116L116FCtcTtc5252AY.610.005448
ORF7a116L116FCtcTtc5050AY.640.029762
ORF7a116L116FCtcTtc4747AY.560.075441
ORF7a116L116FCtcTtc4545AY.1050.028939
ORF7a116L116FCtcTtc4040AY.1190.001412
ORF7a116L116FCtcTtc3939AY.100.020668
ORF7a116L116FCtcTtc3939AY.4.30.032828
ORF7a116L116FCtcTtc3838B.1.10.000689
ORF7a116L116FCtcTtc3636P.10.000567
ORF7a116L116FCtcTtc3535AY.330.002337
ORF7a116L116FCtcTtc3535AY.460.003643
ORF7a116L116FCtcTtc3434AY.75.10.006131
ORF7a116L116FCtcTtc3333AY.1170.002789
ORF7a116L116FCtcTtc3333AY.850.014097
ORF7a116L116FCtcTtc3232B.1.4290.000753
ORF7a116L116FCtcTtc3131AE.31
ORF7a116L116FCtcTtc3131B.1.6210.002744
ORF7a116L116FCtcTtc3030AY.470.000933
ORF7a116L116FCtcTtc3030AY.590.01589
ORF7a116L116FCtcTtc3030AY.7.10.003381
ORF7a116L116FCtcTtc2929AY.370.009166
ORF7a116L116FCtcTtc2929AY.420.001167
ORF7a116L116FCtcTtc2929AY.700.006047
ORF7a116L116FCtcTtc2929AY.9.20.001065
ORF7a116L116FCtcTtc2626AY.390.000642
ORF7a116L116FCtcTtc2626AY.450.003164
ORF7a116L116FCtcTtc2525AY.99.20.002304
ORF7a116L116FCtcTtc2323AY.860.019087
ORF7a116L116FCtcTtc2222B.1.2140.080586
ORF7a116L116FCtcTtc2121AY.580.019056
ORF7a116L116FCtcTtc2021B.1.5960.001743
ORF7a116L116FCtCTtT121B.1.5960.000087
ORF7a116L116FCtcTtc1818AY.350.004195
ORF7a116L116FCtcTtc1818AY.5.40.004981
ORF7a116L116FCtcTtc1818AY.780.027735
ORF7a116L116FCtcTtc1818AY.98.10.000872
ORF7a116L116FCtcTtc1717AY.680.004654
ORF7a116L116FCtcTtc1717AY.920.004884
ORF7a116L116FCtcTtc1616AY.1100.001803
ORF7a116L116FCtcTtc1616AY.730.010645
ORF7a116L116FCtcTtc1515AZ.10.01301
ORF7a116L116FCtcTtc1415B.1.3510.000416
ORF7a116L116FCtCTtT115B.1.3510.00003
ORF7a116L116FCtcTtc1414AY.200.000544
ORF7a116L116FCtcTtc1414AY.90.000946
ORF7a116L116FCtcTtc1313AY.230.000907
ORF7a116L116FCtcTtc1313AY.240.005603
ORF7a116L116FCtcTtc1313AY.280.024575
ORF7a116L116FCtcTtc1313AY.410.003821
ORF7a116L116FCtcTtc1313AY.690.002427
ORF7a116L116FCtcTtc1313AY.790.015738
ORF7a116L116FCtcTtc1313B.1.3110.003569
ORF7a116L116FCtcTtc1212AY.210.02277
ORF7a116L116FCtcTtc1111AY.1000.000506
ORF7a116L116FCtcTtc1111AY.39.10.000436
ORF7a116L116FCtcTtc1111AY.4.20.000239
ORF7a116L116FCtcTtc1111B.1.1.3690.004909
ORF7a116L116FCtcTtc1111B.1.3770.050228
ORF7a116L116FCtcTtc1010AY.9.10.000837
ORF7a116L116FCtcTtc1010B.1.1.5190.000397
ORF7a116L116FCtcTtc99AY.650.004797
ORF7a116L116FCtcTtc99AY.770.010147
ORF7a116L116FCtcTtc99AZ.20.007389
ORF7a116L116FCtcTtc99B.1.360.001313
ORF7a116L116FCtcTtc99B.1.4370.1875
ORF7a116L116FCtcTtc99B.1.617.10.001161
ORF7a116L116FCtcTtc88AY.1140.001849
ORF7a116L116FCtcTtc88AY.1200.000297
ORF7a116L116FCtcTtc88AY.46.20.005083
ORF7a116L116FCtcTtc88AY.840.0035
ORF7a116L116FCtcTtc77A.10.001973
ORF7a116L116FCtcTtc77AY.1060.002344
ORF7a116L116FCtcTtc77AY.1210.000947
ORF7a116L116FCtcTtc77AY.710.003325
ORF7a116L116FCtcTtc77AY.930.001912
ORF7a116L116FCtcTtc77B.1.2430.000487
ORF7a116L116FCtcTtc77B.1.6350.122807
ORF7a116L116FCtcTtc66AY.600.005629
ORF7a116L116FCtcTtc66AY.7.20.003356
ORF7a116L116FCtcTtc66AY.880.005305
ORF7a116L116FCtcTtc66B.1.221.40.025
ORF7a116L116FCtcTtc66B.1.6230.003219
ORF7a116L116FCtcTtc66P.1.140.000287
ORF7a116L116FCtcTtc55A0.001935
ORF7a116L116FCtcTtc55AY.1160.001434
ORF7a116L116FCtcTtc55AY.46.40.000823
ORF7a116L116FCtcTtc55AY.50.000103
ORF7a116L116FCtcTtc55AY.740.000578
ORF7a116L116FCtcTtc55AY.870.004163
ORF7a116L116FCtcTtc55B.1.1.10.001633
ORF7a116L116FCtcTtc55B.1.1.3120.00956
ORF7a116L116FCtcTtc55B.1.177.730.002831
ORF7a116L116FCtcTtc55B.1.2580.000333
ORF7a116L116FCtcTtc55B.1.258.170.00052
ORF7a116L116FCtcTtc55B.1.6180.020161
ORF7a116L116FCtcTtc55C.370.00058
ORF7a116L116FCtcTtc55P.20.000933
ORF7a116L116FCtcTtc44AY.10.001583
ORF7a116L116FCtcTtc44AY.1010.001962
ORF7a116L116FCtcTtc44AY.1130.00057
ORF7a116L116FCtcTtc44AY.120.001264
ORF7a116L116FCtcTtc44AY.320.00213
ORF7a116L116FCtcTtc44AY.340.000388
ORF7a116L116FCtcTtc44AY.4.2.10.000596
ORF7a116L116FCtcTtc44AY.46.60.000289
ORF7a116L116FCtcTtc44AY.720.005442
ORF7a116L116FCtcTtc44AY.810.007968
ORF7a116L116FCtcTtc44B.1.2340.000528
ORF7a116L116FCtcTtc33A.2.50.001497
ORF7a116L116FCtcTtc33A.23.10.002113
ORF7a116L116FCtcTtc33AY.1040.005952
ORF7a116L116FCtcTtc33AY.1180.000188
ORF7a116L116FCtcTtc33AY.60.000123
ORF7a116L116FCtcTtc33AY.940.001328
ORF7a116L116FCtcTtc33AY.950.002283
ORF7a116L116FCtcTtc33AY.99.10.004658
ORF7a116L116FCtcTtc33B.1.1.2220.000612
ORF7a116L116FCtcTtc33B.1.1.2840.000322
ORF7a116L116FCtcTtc33B.1.177.570.000843
ORF7a116L116FCtcTtc33B.1.36.310.005254
ORF7a116L116FCtcTtc33B.1.3610.003866
ORF7a116L116FCtcTtc33B.1.3750.002459
ORF7a116L116FCtcTtc33B.1.4270.000151
ORF7a116L116FCtcTtc33B.1.466.20.001174
ORF7a116L116FCtcTtc33B.1.5250.000339
ORF7a116L116FCtcTtc33B.1.5650.002431
ORF7a116L116FCtcTtc33B.1.6340.010274
ORF7a116L116FCtcTtc33P.1.120.001452
ORF7a116L116FCtcTtc33P.1.150.000697
ORF7a116L116FCtcTtc120.055556
ORF7a116L116FCtCTtT120.055556
ORF7a116L116FCtcTtc22AY.1090.001479
ORF7a116L116FCtcTtc22AY.1110.000366
ORF7a116L116FCtcTtc22AY.120.10.000642
ORF7a116L116FCtcTtc22AY.220.004184
ORF7a116L116FCtcTtc22AY.360.000296
ORF7a116L116FCtcTtc22AY.46.10.002053
ORF7a116L116FCtcTtc22AY.630.000774
ORF7a116L116FCtcTtc22AY.70.000392
ORF7a116L116FCtcTtc22AY.800.002257
ORF7a116L116FCtcTtc22AY.910.001461
ORF7a116L116FCtcTtc22B0.000256
ORF7a116L116FCtcTtc22B.1.1.1760.000879
ORF7a116L116FCtcTtc22B.1.1.2630.003115
ORF7a116L116FCtcTtc22B.1.1.280.000622
ORF7a116L116FCtcTtc22B.1.1.3700.025316
ORF7a116L116FCtcTtc22B.1.160.160.001859
ORF7a116L116FCtcTtc22B.1.177.40.000422
ORF7a116L116FCtcTtc22B.1.177.770.001452
ORF7a116L116FCtcTtc22B.1.177.810.000379
ORF7a116L116FCtcTtc22B.1.2400.000431
ORF7a116L116FCtcTtc22B.1.3200.002491
ORF7a116L116FCtcTtc22B.1.36.80.002
ORF7a116L116FCtcTtc22B.1.5610.000794
ORF7a116L116FCtcTtc22B.1.5890.015152
ORF7a116L116FCtcTtc22B.1.6370.000146
ORF7a116L116FCtcTtc22D.20.00015
ORF7a116L116FCtcTtc22P.1.170.000324
ORF7a116L116FCtcTtc22P.1.70.000639
ORF7a116L116FCtcTtc22Q.80.00033
ORF7a116L116FCtcTtc22R.10.00018
ORF7a116L116FCtcTtc11A.2.40.003367
ORF7a116L116FCtcTtc11AE.10.011364
ORF7a116L116FCtcTtc11AY.1070.000466
ORF7a116L116FCtcTtc11AY.1080.001103
ORF7a116L116FCtcTtc11AY.110.001339
ORF7a116L116FCtcTtc11AY.120.20.001285
ORF7a116L116FCtcTtc11AY.23.10.000417
ORF7a116L116FCtcTtc11AY.270.000065
ORF7a116L116FCtcTtc11AY.34.10.00051
ORF7a116L116FCtcTtc11AY.4.50.000107
ORF7a116L116FCtcTtc11AY.46.50.000198
ORF7a116L116FCtcTtc11AY.660.00107
ORF7a116L116FCtcTtc11AY.760.004831
ORF7a116L116FCtcTtc11AY.820.001357
ORF7a116L116FCtcTtc11AY.830.001724
ORF7a116L116FCtcTtc11AY.900.000684
ORF7a116L116FCtcTtc11AY.970.001701
ORF7a116L116FCtcTtc11B.1.1.1210.002427
ORF7a116L116FCtcTtc11B.1.1.2140.000055
ORF7a116L116FCtcTtc11B.1.1.2650.003155
ORF7a116L116FCtcTtc11B.1.1.2730.006757
ORF7a116L116FCtcTtc11B.1.1.330.000421
ORF7a116L116FCtcTtc11B.1.1.3720.000689
ORF7a116L116FCtcTtc11B.1.1.4090.002833
ORF7a116L116FCtcTtc11B.1.1.4480.002033
ORF7a116L116FCtcTtc11B.1.1.450.014085
ORF7a116L116FCtcTtc11B.1.1110.001175
ORF7a116L116FCtcTtc11B.1.1280.000635
ORF7a116L116FCtcTtc11B.1.1430.021277
ORF7a116L116FCtcTtc11B.1.1470.000756
ORF7a116L116FCtcTtc11B.1.1570.002985
ORF7a116L116FCtcTtc11B.1.177.160.000664
ORF7a116L116FCtcTtc11B.1.177.530.002392
ORF7a116L116FCtcTtc11B.1.177.80.000752
ORF7a116L116FCtcTtc11B.1.1840.058824
ORF7a116L116FCtcTtc11B.1.1950.005025
ORF7a116L116FCtcTtc11B.1.2100.002132
ORF7a116L116FCtcTtc11B.1.2210.000071
ORF7a116L116FCtcTtc11B.1.2320.000537
ORF7a116L116FCtcTtc11B.1.2370.004975
ORF7a116L116FCtcTtc11B.1.258.100.011364
ORF7a116L116FCtcTtc11B.1.258.110.000396
ORF7a116L116FCtcTtc11B.1.2790.000514
ORF7a116L116FCtcTtc11B.1.3460.001311
ORF7a116L116FCtcTtc11B.1.36.270.000763
ORF7a116L116FCtcTtc11B.1.3670.000792
ORF7a116L116FCtcTtc11B.1.4090.000781
ORF7a116L116FCtcTtc11B.1.4160.001269
ORF7a116L116FCtcTtc11B.1.4260.001009
ORF7a116L116FCtcTtc11B.1.4280.00102
ORF7a116L116FCtcTtc11B.1.438.10.000107
ORF7a116L116FCtcTtc11B.1.5090.000866
ORF7a116L116FCtcTtc11B.1.5300.007143
ORF7a116L116FCtcTtc11B.1.5440.006024
ORF7a116L116FCtcTtc11B.1.5640.000426
ORF7a116L116FCtcTtc11B.1.5770.000687
ORF7a116L116FCtcTtc11B.1.5800.004065
ORF7a116L116FCtcTtc11B.1.5880.00091
ORF7a116L116FCtcTtc11B.1.5900.004545
ORF7a116L116FCtcTtc11B.1.6120.002653
ORF7a116L116FCtcTtc11B.1.619.10.000641
ORF7a116L116FCtcTtc11B.1.6280.000352
ORF7a116L116FCtcTtc11B.1.930.000934
ORF7a116L116FCtcTtc11B.330.021277
ORF7a116L116FCtcTtc11B.560.028571
ORF7a116L116FCtcTtc11C.10.002392
ORF7a116L116FCtcTtc11C.300.001727
ORF7a116L116FCtcTtc11C.36.30.000567
ORF7a116L116FCtcTtc11P.1.17.10.000875
ORF7a116L116FCtcTtc11P.1.20.001156
ORF7a116L116FCtcTtc11Q.10.000126
ORF7a116L116FCtcTtc11Q.20.000613
ORF7a116L116FCtcTtc11Q.40.000455
ORF7a116L116FCtcTtc11Q.70.001111
ORF7a116L116FCtcTtc11W.40.001351