CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = I3del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a3I3del2delaTTa--35330.94285727400-27402
ORF7a3I3del2delATt--t3520.057142927400-27402

Details of the mutation I3del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a3I3del2aTTa--3335All0.000006
ORF7a3I3del2ATt--t235All0
ORF7a3I3del2aTTa--1818AY.40.000028
ORF7a3I3del2aTTa--1112B.1.1.70.00001
ORF7a3I3del2ATt--t112B.1.1.70.000001
ORF7a3I3del2aTTa--11A0.000387
ORF7a3I3del2aTTa--11AY.390.000025
ORF7a3I3del2aTTa--11AY.4.30.000842
ORF7a3I3del2aTTa--11AY.430.000004
ORF7a3I3del2ATt--t11P.10.000016