CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = I3T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a3I3TnonsynaTtaCt9219190.99782827400-27402
ORF7a3I3TnonsynaTTaCG92120.0021715527400-27402

Details of the mutation I3T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a3I3TaTtaCt919921All0.000176
ORF7a3I3TaTTaCG2921All0
ORF7a3I3TaTtaCt266266C.370.030873
ORF7a3I3TaTtaCt252252B.1.1.70.000226
ORF7a3I3TaTtaCt6262C.350.047988
ORF7a3I3TaTtaCt4343B.1.20.000379
ORF7a3I3TaTtaCt3232AY.390.000791
ORF7a3I3TaTtaCt2828B.1.258.230.666667
ORF7a3I3TaTtaCt2323AY.250.000138
ORF7a3I3TaTtaCt2222B.1.617.20.000083
ORF7a3I3TaTtaCt2121B.1.3510.000624
ORF7a3I3TaTtaCt1818AY.4.50.001935
ORF7a3I3TaTtaCt1717AY.40.000026
ORF7a3I3TaTtaCt1717B.1.1600.00053
ORF7a3I3TaTtaCt1717Q.80.002803
ORF7a3I3TaTtaCt1010AY.1030.000062
ORF7a3I3TaTtaCt88B.1.258.170.000832
ORF7a3I3TaTtaCt77B.1.1770.000092
ORF7a3I3TaTtaCt66B.1.5900.027273
ORF7a3I3TaTtaCt44C.37.10.010471
ORF7a3I3TaTtaCt33AY.430.000013
ORF7a3I3TaTtaCt33B.10.000027
ORF7a3I3TaTtaCt33B.1.10.000054
ORF7a3I3TaTtaCt33B.1.5770.002062
ORF7a3I3TaTtaCt33P.10.000047
ORF7a3I3TaTtaCt33R.10.00027
ORF7a3I3TaTTaCG220.111111
ORF7a3I3TaTtaCt22AY.1020.000053
ORF7a3I3TaTtaCt22AY.120.10.000642
ORF7a3I3TaTtaCt22AY.200.000078
ORF7a3I3TaTtaCt22AY.420.00008
ORF7a3I3TaTtaCt22AY.480.00093
ORF7a3I3TaTtaCt22AY.750.000112
ORF7a3I3TaTtaCt22B.1.1.10.000653
ORF7a3I3TaTtaCt22B.1.2580.000133
ORF7a3I3TaTtaCt22B.1.3360.004878
ORF7a3I3TaTtaCt22B.1.4290.000047
ORF7a3I3TaTtaCt22W.40.002703
ORF7a3I3TaTtaCt11AY.1140.000231
ORF7a3I3TaTtaCt11AY.1170.000085
ORF7a3I3TaTtaCt11AY.160.00038
ORF7a3I3TaTtaCt11AY.260.000028
ORF7a3I3TaTtaCt11AY.30.00001
ORF7a3I3TaTtaCt11AY.300.000396
ORF7a3I3TaTtaCt11AY.370.000316
ORF7a3I3TaTtaCt11AY.410.000294
ORF7a3I3TaTtaCt11AY.50.000021
ORF7a3I3TaTtaCt11B.1.1.2140.000055
ORF7a3I3TaTtaCt11B.1.1.2220.000204
ORF7a3I3TaTtaCt11B.1.1.2840.000107
ORF7a3I3TaTtaCt11B.1.1.480.002874
ORF7a3I3TaTtaCt11B.1.1190.010526
ORF7a3I3TaTtaCt11B.1.177.210.000076
ORF7a3I3TaTtaCt11B.1.177.600.000218
ORF7a3I3TaTtaCt11B.1.177.70.000165
ORF7a3I3TaTtaCt11B.1.2430.00007
ORF7a3I3TaTtaCt11B.1.466.20.000391
ORF7a3I3TaTtaCt11B.1.6210.000089
ORF7a3I3TaTtaCt11B.1.6370.000073
ORF7a3I3TaTtaCt11B.4.40.018868
ORF7a3I3TaTtaCt11D.20.000075
ORF7a3I3TaTtaCt11P.1.160.000374
ORF7a3I3TaTtaCt11Q.10.000126
ORF7a3I3TaTtaCt11Q.30.000145