CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = H47del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a47H47deldelCAT---32383238127532-27534

Details of the mutation H47del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a47H47delCAT---32383238All0.000619
ORF7a47H47delCAT---553553B.1.1.70.000495
ORF7a47H47delCAT---418418AY.250.002514
ORF7a47H47delCAT---288288AY.40.000448
ORF7a47H47delCAT---272272B.1.617.20.001024
ORF7a47H47delCAT---180180B.1.177.210.013765
ORF7a47H47delCAT---122122AY.1030.000758
ORF7a47H47delCAT---104104AY.30.001034
ORF7a47H47delCAT---9696AY.430.000425
ORF7a47H47delCAT---7575AY.260.002123
ORF7a47H47delCAT---7272AY.440.000438
ORF7a47H47delCAT---6363AY.1000.002898
ORF7a47H47delCAT---5858AY.290.000915
ORF7a47H47delCAT---5252AY.470.001617
ORF7a47H47delCAT---5151B.1.20.000449
ORF7a47H47delCAT---4848AY.3.10.004092
ORF7a47H47delCAT---4646B.10.000421
ORF7a47H47delCAT---4545AY.390.001112
ORF7a47H47delCAT---3737B.1.1.2840.003974
ORF7a47H47delCAT---3737B.1.6210.003275
ORF7a47H47delCAT---2424B.1.1.2140.001331
ORF7a47H47delCAT---2222P.10.000347
ORF7a47H47delCAT---2020AY.46.40.00329
ORF7a47H47delCAT---1919AY.420.000764
ORF7a47H47delCAT---1919AY.7.20.010626
ORF7a47H47delCAT---1919B.1.1770.00025
ORF7a47H47delCAT---1818B.1.5260.000423
ORF7a47H47delCAT---1616AY.1190.000565
ORF7a47H47delCAT---1616C.370.001857
ORF7a47H47delCAT---1515AY.50.00031
ORF7a47H47delCAT---1515B.1.3510.000446
ORF7a47H47delCAT---1414B.1.5960.00122
ORF7a47H47delCAT---1414B.1.6370.001023
ORF7a47H47delCAT---1313AY.200.000505
ORF7a47H47delCAT---1212AY.1020.000318
ORF7a47H47delCAT---1212B.1.3240.019262
ORF7a47H47delCAT---1111AY.1200.000409
ORF7a47H47delCAT---1111AY.350.002564
ORF7a47H47delCAT---1111B.1.4290.000259
ORF7a47H47delCAT---1010R.10.0009
ORF7a47H47delCAT---99AY.340.000873
ORF7a47H47delCAT---99AY.540.000858
ORF7a47H47delCAT---99L.10.017143
ORF7a47H47delCAT---88AY.120.10.002568
ORF7a47H47delCAT---88AY.98.10.000387
ORF7a47H47delCAT---88B.1.5250.000905
ORF7a47H47delCAT---77AY.1160.002007
ORF7a47H47delCAT---77AY.39.10.000277
ORF7a47H47delCAT---77AY.4.20.000152
ORF7a47H47delCAT---77B.1.10.000127
ORF7a47H47delCAT---77B.1.1600.000218
ORF7a47H47delCAT---77P.1.150.001626
ORF7a47H47delCAT---66AY.1180.000376
ORF7a47H47delCAT---66AY.230.000418
ORF7a47H47delCAT---66B.1.2340.000792
ORF7a47H47delCAT---55AY.450.000608
ORF7a47H47delCAT---55AY.610.000524
ORF7a47H47delCAT---55AY.9.10.000419
ORF7a47H47delCAT---55AY.9.20.000184
ORF7a47H47delCAT---55B.1.1.560.089286
ORF7a47H47delCAT---44AY.1130.00057
ORF7a47H47delCAT---44AY.1210.000541
ORF7a47H47delCAT---44AY.330.000267
ORF7a47H47delCAT---44AY.750.000224
ORF7a47H47delCAT---44AY.910.002922
ORF7a47H47delCAT---33AY.1070.001398
ORF7a47H47delCAT---33AY.1100.000338
ORF7a47H47delCAT---33AY.29.10.000662
ORF7a47H47delCAT---33AY.4.50.000322
ORF7a47H47delCAT---33AY.880.002653
ORF7a47H47delCAT---33AY.920.000862
ORF7a47H47delCAT---33AY.990.003148
ORF7a47H47delCAT---33B.1.1.1210.007282
ORF7a47H47delCAT---33B.1.1.250.001706
ORF7a47H47delCAT---33B.1.4270.000151
ORF7a47H47delCAT---33B.1.6260.017143
ORF7a47H47delCAT---22A0.000774
ORF7a47H47delCAT---22A.280.005291
ORF7a47H47delCAT---22AY.1080.002205
ORF7a47H47delCAT---22AY.1090.001479
ORF7a47H47delCAT---22AY.1140.000462
ORF7a47H47delCAT---22AY.140.000176
ORF7a47H47delCAT---22AY.300.000791
ORF7a47H47delCAT---22AY.4.2.10.000298
ORF7a47H47delCAT---22AY.4.30.001684
ORF7a47H47delCAT---22AY.570.001312
ORF7a47H47delCAT---22AY.660.002139
ORF7a47H47delCAT---22AY.710.00095
ORF7a47H47delCAT---22AY.850.000854
ORF7a47H47delCAT---22AY.90.000135
ORF7a47H47delCAT---22B.1.1.3180.000604
ORF7a47H47delCAT---22B.1.1.5190.000079
ORF7a47H47delCAT---22B.1.177.430.002954
ORF7a47H47delCAT---22B.1.177.810.000379
ORF7a47H47delCAT---22B.1.177.860.000367
ORF7a47H47delCAT---22B.1.214.20.001199
ORF7a47H47delCAT---22B.1.2430.000139
ORF7a47H47delCAT---22B.1.258.110.000793
ORF7a47H47delCAT---22B.1.3750.001639
ORF7a47H47delCAT---22B.1.5750.000607
ORF7a47H47delCAT---22B.1.617.30.00597
ORF7a47H47delCAT---22B.1.621.10.001012
ORF7a47H47delCAT---22C.36.30.001134
ORF7a47H47delCAT---22P.1.140.000096
ORF7a47H47delCAT---22P.20.000373
ORF7a47H47delCAT---22Q.80.00033
ORF7a47H47delCAT---11A.10.000282
ORF7a47H47delCAT---11A.23.10.000704
ORF7a47H47delCAT---11AY.1010.00049
ORF7a47H47delCAT---11AY.116.10.000311
ORF7a47H47delCAT---11AY.130.000161
ORF7a47H47delCAT---11AY.160.00038
ORF7a47H47delCAT---11AY.240.000431
ORF7a47H47delCAT---11AY.380.000499
ORF7a47H47delCAT---11AY.460.000104
ORF7a47H47delCAT---11AY.5.30.000337
ORF7a47H47delCAT---11AY.5.40.000277
ORF7a47H47delCAT---11AY.530.000288
ORF7a47H47delCAT---11AY.590.00053
ORF7a47H47delCAT---11AY.680.000274
ORF7a47H47delCAT---11AY.70.000196
ORF7a47H47delCAT---11AY.7.10.000113
ORF7a47H47delCAT---11AY.730.000665
ORF7a47H47delCAT---11AY.740.000116
ORF7a47H47delCAT---11AY.790.001211
ORF7a47H47delCAT---11AY.80.000606
ORF7a47H47delCAT---11AY.940.000443
ORF7a47H47delCAT---11AY.980.000079
ORF7a47H47delCAT---11AY.99.20.000092
ORF7a47H47delCAT---11AZ.20.000821
ORF7a47H47delCAT---11B0.000128
ORF7a47H47delCAT---11B.1.1.1570.000913
ORF7a47H47delCAT---11B.1.1.1740.003378
ORF7a47H47delCAT---11B.1.1.1920.002309
ORF7a47H47delCAT---11B.1.1.330.000421
ORF7a47H47delCAT---11B.1.1.5220.017241
ORF7a47H47delCAT---11B.1.1150.021739
ORF7a47H47delCAT---11B.1.1400.018868
ORF7a47H47delCAT---11B.1.177.500.004695
ORF7a47H47delCAT---11B.1.177.620.001192
ORF7a47H47delCAT---11B.1.177.830.001481
ORF7a47H47delCAT---11B.1.2210.000071
ORF7a47H47delCAT---11B.1.2400.000216
ORF7a47H47delCAT---11B.1.258.170.000104
ORF7a47H47delCAT---11B.1.351.20.000303
ORF7a47H47delCAT---11B.1.3560.001727
ORF7a47H47delCAT---11B.1.3710.001122
ORF7a47H47delCAT---11B.1.4160.001269
ORF7a47H47delCAT---11B.1.438.10.000107
ORF7a47H47delCAT---11B.1.4590.004082
ORF7a47H47delCAT---11B.1.466.20.000391
ORF7a47H47delCAT---11B.1.4700.001404
ORF7a47H47delCAT---11B.1.5350.028571
ORF7a47H47delCAT---11B.1.5680.001111
ORF7a47H47delCAT---11B.1.5760.000907
ORF7a47H47delCAT---11B.1.5820.000491
ORF7a47H47delCAT---11B.1.5950.000261
ORF7a47H47delCAT---11B.1.6380.052632
ORF7a47H47delCAT---11B.1.9.10.032258
ORF7a47H47delCAT---11B.550.00295
ORF7a47H47delCAT---11K.30.006173
ORF7a47H47delCAT---11P.1.10.000318
ORF7a47H47delCAT---11P.1.130.000898
ORF7a47H47delCAT---11P.1.160.000374
ORF7a47H47delCAT---11P.1.30.034483
ORF7a47H47delCAT---11P.1.40.000977
ORF7a47H47delCAT---11Q.70.001111