CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = H47X

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a47H47XnonsynCaTTaA24110.45833327532-27534
ORF7a47H47XnonsynCATTGA2490.37527532-27534
ORF7a47H47XnonsynCaTTaG2440.16666727532-27534

Details of the mutation H47X within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a47H47XCaTTaA1124All0.000002
ORF7a47H47XCATTGA924All0.000002
ORF7a47H47XCaTTaG424All0.000001
ORF7a47H47XCaTTaA716AY.250.000042
ORF7a47H47XCATTGA616AY.250.000036
ORF7a47H47XCaTTaG316AY.250.000018
ORF7a47H47XCaTTaA48B.1.617.20.000015
ORF7a47H47XCATTGA38B.1.617.20.000011
ORF7a47H47XCaTTaG18B.1.617.20.000004