CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = G38del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a38G38del1delggAgg-1391210.87050427505-27507
ORF7a38G38del1delGga-ga13990.064748227505-27507
ORF7a38G38del1delGGa-Aa13940.02877727505-27507
ORF7a38G38del1delGGa-Na13920.014388527505-27507
ORF7a38G38del1delGGA-NN13910.0071942427505-27507
ORF7a38G38del1delGgA-gN13910.0071942427505-27507
ORF7a38G38del1delGgA-gC13910.0071942427505-27507

Details of the mutation G38del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a38G38del1ggAgg-121139All0.000023
ORF7a38G38del1Gga-ga9139All0.000002
ORF7a38G38del1GGa-Aa4139All0.000001
ORF7a38G38del1GGa-Na2139All0
ORF7a38G38del1GgA-gN1139All0
ORF7a38G38del1GGA-NN1139All0
ORF7a38G38del1GgA-gC1139All0
ORF7a38G38del1ggAgg-3435B.1.617.20.000128
ORF7a38G38del1Gga-ga135B.1.617.20.000004
ORF7a38G38del1ggAgg-2727B.1.1.2840.0029
ORF7a38G38del1ggAgg-2427B.1.1.70.000021
ORF7a38G38del1Gga-ga227B.1.1.70.000002
ORF7a38G38del1GGa-Aa127B.1.1.70.000001
ORF7a38G38del1ggAgg-66AY.30.00006
ORF7a38G38del1ggAgg-45AY.3.10.000341
ORF7a38G38del1GGA-NN15AY.3.10.000085
ORF7a38G38del1GGa-Aa35U.10.038462
ORF7a38G38del1GGa-Na25U.10.025641
ORF7a38G38del1ggAgg-34AY.250.000018
ORF7a38G38del1GgA-gC14AY.250.000006
ORF7a38G38del1ggAgg-12AY.1030.000006
ORF7a38G38del1Gga-ga12AY.1030.000006
ORF7a38G38del1ggAgg-22AY.1140.000462
ORF7a38G38del1Gga-ga12AY.440.000006
ORF7a38G38del1ggAgg-12AY.440.000006
ORF7a38G38del1ggAgg-22AY.470.000062
ORF7a38G38del1ggAgg-22B.10.000018
ORF7a38G38del1ggAgg-22B.1.1.2140.000111
ORF7a38G38del1ggAgg-12B.1.20.000009
ORF7a38G38del1Gga-ga12B.1.20.000009
ORF7a38G38del1ggAgg-22B.1.5260.000047
ORF7a38G38del1Gga-ga22C.370.000232
ORF7a38G38del1ggAgg-11AY.120.10.000321
ORF7a38G38del1ggAgg-11AY.130.000161
ORF7a38G38del1ggAgg-11AY.160.00038
ORF7a38G38del1ggAgg-11AY.260.000028
ORF7a38G38del1ggAgg-11AY.330.000067
ORF7a38G38del1ggAgg-11AY.390.000025
ORF7a38G38del1GgA-gN11AY.450.000122
ORF7a38G38del1ggAgg-11AY.460.000104
ORF7a38G38del1ggAgg-11B.1.1.700.000341
ORF7a38G38del1Gga-ga11B.1.258.170.000104
ORF7a38G38del1ggAgg-11B.1.5350.028571
ORF7a38G38del1ggAgg-11B.1.5820.000491