CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = G38V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a38G38VnonsyngGagTa900389900.99855627505-27507
ORF7a38G38VnonsyngGAgTC9003120.0013328927505-27507
ORF7a38G38VnonsyngGAgTT900310.00011107427505-27507

Details of the mutation G38V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a38G38VgGagTa89909003All0.001719
ORF7a38G38VgGAgTC129003All0.000002
ORF7a38G38VgGAgTT19003All0
ORF7a38G38VgGagTa28682868B.1.1.70.002567
ORF7a38G38VgGagTa12301230AY.40.001914
ORF7a38G38VgGagTa10661066AY.260.030179
ORF7a38G38VgGagTa558558B.1.617.20.002101
ORF7a38G38VgGagTa538538AY.430.002384
ORF7a38G38VgGagTa277277AY.1030.00172
ORF7a38G38VgGagTa203203AY.460.021128
ORF7a38G38VgGagTa116116AY.30.001154
ORF7a38G38VgGagTa102102B.1.20.000898
ORF7a38G38VgGagTa8484B.10.000769
ORF7a38G38VgGagTa8282AY.440.000499
ORF7a38G38VgGagTa8080P.10.00126
ORF7a38G38VgGagTa7676D.20.005703
ORF7a38G38VgGagTa7575AY.60.003085
ORF7a38G38VgGagTa5959AY.1020.001564
ORF7a38G38VgGagTa5454C.370.006267
ORF7a38G38VgGagTa4444AY.390.001087
ORF7a38G38VgGagTa4343B.1.1770.000566
ORF7a38G38VgGagTa4242B.1.4290.000988
ORF7a38G38VgGagTa3838AY.3.10.00324
ORF7a38G38VgGagTa3737B.1.10.000671
ORF7a38G38VgGagTa3535AY.200.00136
ORF7a38G38VgGagTa3535AY.420.001408
ORF7a38G38VgGagTa3535B.1.2210.002486
ORF7a38G38VgGagTa3434AY.750.001905
ORF7a38G38VgGagTa3232AY.1000.001472
ORF7a38G38VgGagTa3232AY.290.000505
ORF7a38G38VgGagTa3232B.1.3510.000951
ORF7a38G38VgGagTa3030AY.470.000933
ORF7a38G38VgGagTa3030B.1.1.5190.001191
ORF7a38G38VgGagTa2929AY.410.008524
ORF7a38G38VgGagTa2727B.1.1600.000842
ORF7a38G38VgGagTa2727B.1.2430.001879
ORF7a38G38VgGagTa2727B.1.6210.00239
ORF7a38G38VgGagTa2424B.1.5250.002716
ORF7a38G38VgGagTa2424P.1.140.001147
ORF7a38G38VgGagTa2323AY.4.20.000499
ORF7a38G38VgGagTa2121B.1.177.120.003186
ORF7a38G38VgGagTa2121B.1.5260.000494
ORF7a38G38VgGagTa2020AK.20.909091
ORF7a38G38VgGagTa2020AY.50.000413
ORF7a38G38VgGagTa2020B.1.2580.001331
ORF7a38G38VgGagTa1919AY.1170.001606
ORF7a38G38VgGagTa1919AY.99.20.001751
ORF7a38G38VgGagTa1818B.1.5960.001568
ORF7a38G38VgGagTa1818Q.80.002968
ORF7a38G38VgGagTa1717AY.70.003332
ORF7a38G38VgGagTa1717B.1.617.10.002192
ORF7a38G38VgGAgTC1216AY.250.000072
ORF7a38G38VgGagTa416AY.250.000024
ORF7a38G38VgGagTa1616AY.610.001676
ORF7a38G38VgGagTa1616B.1.177.330.026316
ORF7a38G38VgGagTa1414AY.450.001704
ORF7a38G38VgGagTa1313AY.9.20.000477
ORF7a38G38VgGagTa1313AY.98.10.00063
ORF7a38G38VgGagTa1212AY.330.000801
ORF7a38G38VgGagTa1111AY.39.10.000436
ORF7a38G38VgGagTa1111B.1.1.3040.030899
ORF7a38G38VgGagTa1111B.1.214.30.078571
ORF7a38G38VgGagTa1111P.1.70.003512
ORF7a38G38VgGagTa1010AY.1130.001424
ORF7a38G38VgGagTa1010AY.1200.000372
ORF7a38G38VgGagTa1010AY.230.000697
ORF7a38G38VgGagTa1010AY.540.000953
ORF7a38G38VgGagTa99AY.1190.000318
ORF7a38G38VgGagTa99B.1.1.4340.003137
ORF7a38G38VgGagTa99B.1.4270.000454
ORF7a38G38VgGagTa88AY.130.001288
ORF7a38G38VgGagTa88AY.140.000704
ORF7a38G38VgGagTa88AY.16.10.003759
ORF7a38G38VgGagTa88AY.46.20.005083
ORF7a38G38VgGagTa88AY.5.40.002214
ORF7a38G38VgGagTa88B.1.2340.001056
ORF7a38G38VgGagTa77AY.1160.002007
ORF7a38G38VgGagTa77AY.1180.000439
ORF7a38G38VgGagTa77AY.340.000679
ORF7a38G38VgGagTa77B.1.1.3180.002112
ORF7a38G38VgGagTa77B.1.177.780.067961
ORF7a38G38VgGagTa77R.10.00063
ORF7a38G38VgGagTa55A.2.50.002495
ORF7a38G38VgGagTa55AY.1210.000677
ORF7a38G38VgGagTa55AY.29.10.001103
ORF7a38G38VgGagTa55AY.380.002496
ORF7a38G38VgGagTa55AY.650.002665
ORF7a38G38VgGagTa55AY.730.003327
ORF7a38G38VgGagTa55AY.740.000578
ORF7a38G38VgGagTa55AY.90.000338
ORF7a38G38VgGagTa55AY.9.10.000419
ORF7a38G38VgGagTa55AY.930.001365
ORF7a38G38VgGagTa55B.1.1.2140.000277
ORF7a38G38VgGagTa55B.1.1.3720.003444
ORF7a38G38VgGagTa55B.1.1.630.001929
ORF7a38G38VgGagTa55B.1.6370.000365
ORF7a38G38VgGagTa44AE.80.001956
ORF7a38G38VgGagTa44AY.300.001583
ORF7a38G38VgGagTa44AY.400.003857
ORF7a38G38VgGagTa44AY.46.60.000289
ORF7a38G38VgGagTa44AY.710.0019
ORF7a38G38VgGagTa44AY.75.10.000721
ORF7a38G38VgGagTa44B.1.1.3690.001785
ORF7a38G38VgGagTa44B.1.416.10.00625
ORF7a38G38VgGagTa44B.1.5750.001214
ORF7a38G38VgGagTa33AY.1050.001929
ORF7a38G38VgGagTa33AY.270.000194
ORF7a38G38VgGagTa33AY.4.2.10.000447
ORF7a38G38VgGagTa33AY.5.30.001012
ORF7a38G38VgGagTa33AY.530.000863
ORF7a38G38VgGagTa33AY.80.001818
ORF7a38G38VgGagTa33AY.920.000862
ORF7a38G38VgGagTa33B.1.1.4200.003018
ORF7a38G38VgGagTa33B.1.1.4640.004418
ORF7a38G38VgGagTa33B.1.177.810.000568
ORF7a38G38VgGagTa33B.1.214.20.001799
ORF7a38G38VgGagTa33B.1.3110.000824
ORF7a38G38VgGagTa33B.1.360.000438
ORF7a38G38VgGagTa33B.1.36.290.001552
ORF7a38G38VgGagTa33B.1.4090.002344
ORF7a38G38VgGagTa33P.1.170.000485
ORF7a38G38VgGagTa22A0.000774
ORF7a38G38VgGagTa22AY.1040.003968
ORF7a38G38VgGagTa22AY.1060.00067
ORF7a38G38VgGagTa22AY.1070.000932
ORF7a38G38VgGagTa22AY.1090.001479
ORF7a38G38VgGagTa22AY.120.000632
ORF7a38G38VgGagTa22AY.370.000632
ORF7a38G38VgGagTa22AY.39.1.10.001449
ORF7a38G38VgGagTa22AY.46.50.000397
ORF7a38G38VgGagTa22AY.510.001818
ORF7a38G38VgGagTa22AY.520.001629
ORF7a38G38VgGagTa22AY.580.001815
ORF7a38G38VgGagTa22AY.600.001876
ORF7a38G38VgGagTa22AY.630.000774
ORF7a38G38VgGagTa22AY.680.000547
ORF7a38G38VgGagTa22AY.7.20.001119
ORF7a38G38VgGagTa22AY.870.001665
ORF7a38G38VgGagTa22AY.880.001768
ORF7a38G38VgGagTa22AY.910.001461
ORF7a38G38VgGagTa22B0.000256
ORF7a38G38VgGagTa22B.1.1.2910.001485
ORF7a38G38VgGagTa22B.1.1.2940.002532
ORF7a38G38VgGagTa22B.1.1.3110.000716
ORF7a38G38VgGagTa22B.1.1.500.001358
ORF7a38G38VgGagTa22B.1.1.5250.010929
ORF7a38G38VgGagTa22B.1.1.5260.007092
ORF7a38G38VgGagTa22B.1.1470.001512
ORF7a38G38VgGagTa22B.1.160.160.001859
ORF7a38G38VgGagTa22B.1.177.100.001756
ORF7a38G38VgGagTa22B.1.177.560.001335
ORF7a38G38VgGagTa22B.1.2140.007326
ORF7a38G38VgGagTa22B.1.2410.001623
ORF7a38G38VgGagTa22B.1.351.20.000605
ORF7a38G38VgGagTa22B.1.36.100.009569
ORF7a38G38VgGagTa22B.1.3670.001585
ORF7a38G38VgGagTa22B.1.438.10.000215
ORF7a38G38VgGagTa22B.1.466.20.000782
ORF7a38G38VgGagTa22B.1.619.10.001283
ORF7a38G38VgGagTa22B.1.621.10.001012
ORF7a38G38VgGagTa22B.30.001661
ORF7a38G38VgGagTa22C.37.10.005236
ORF7a38G38VgGagTa22P.1.150.000465
ORF7a38G38VgGagTa22P.1.60.003891
ORF7a38G38VgGagTa22Q.10.000253
ORF7a38G38VgGagTa22Y.10.025641
ORF7a38G38VgGagTa11A.23.10.000704
ORF7a38G38VgGagTa11A.290.005319
ORF7a38G38VgGagTa11AD.20.000219
ORF7a38G38VgGagTa11AY.120.2.10.000498
ORF7a38G38VgGagTa11AY.160.00038
ORF7a38G38VgGagTa11AY.190.00114
ORF7a38G38VgGagTa11AY.210.001898
ORF7a38G38VgGagTa11AY.240.000431
ORF7a38G38VgGagTa11AY.280.00189
ORF7a38G38VgGagTa11AY.320.000532
ORF7a38G38VgGagTa11AY.350.000233
ORF7a38G38VgGagTa11AY.360.000148
ORF7a38G38VgGagTa11AY.4.40.000409
ORF7a38G38VgGagTa11AY.4.50.000107
ORF7a38G38VgGagTa11AY.490.003195
ORF7a38G38VgGagTa11AY.560.001605
ORF7a38G38VgGagTa11AY.660.00107
ORF7a38G38VgGagTa11AY.720.001361
ORF7a38G38VgGagTa11AY.770.001127
ORF7a38G38VgGagTa11AY.820.001357
ORF7a38G38VgGagTa11AY.840.000437
ORF7a38G38VgGagTa11AY.940.000443
ORF7a38G38VgGagTa11AY.980.000079
ORF7a38G38VgGagTa11AY.99.10.001553
ORF7a38G38VgGagTa11AZ.20.000821
ORF7a38G38VgGagTa11B.1.1.1120.058824
ORF7a38G38VgGagTa11B.1.1.1210.002427
ORF7a38G38VgGagTa11B.1.1.1640.005155
ORF7a38G38VgGagTa11B.1.1.2160.00089
ORF7a38G38VgGagTa11B.1.1.2220.000204
ORF7a38G38VgGagTa11B.1.1.2770.000759
ORF7a38G38VgGagTa11B.1.1.280.000311
ORF7a38G38VgGagTa11B.1.1.3030.002762
ORF7a38G38VgGagTa11B.1.1.3120.001912
ORF7a38G38VgGagTa11B.1.1.3170.000412
ORF7a38G38VgGagTa11B.1.1.3260.001761
ORF7a38G38VgGagTa11B.1.1.3890.006061
ORF7a38G38VgGagTa11B.1.1.390.00051
ORF7a38G38VgGagTa11B.1.1.4160.000905
ORF7a38G38VgGagTa11B.1.1.4320.001266
ORF7a38G38VgGagTa11B.1.1.540.003021
ORF7a38G38VgGagTa11B.1.1.670.004566
ORF7a38G38VgGagTa11B.1.110.30.000718
ORF7a38G38VgGagTa11B.1.1570.002985
ORF7a38G38VgGagTa11B.1.160.70.002079
ORF7a38G38VgGagTa11B.1.177.530.002392
ORF7a38G38VgGagTa11B.1.177.80.000752
ORF7a38G38VgGagTa11B.1.177.830.001481
ORF7a38G38VgGagTa11B.1.221.10.002907
ORF7a38G38VgGagTa11B.1.221.30.000833
ORF7a38G38VgGagTa11B.1.2220.001692
ORF7a38G38VgGagTa11B.1.2360.002053
ORF7a38G38VgGagTa11B.1.2400.000216
ORF7a38G38VgGagTa11B.1.258.170.000104
ORF7a38G38VgGagTa11B.1.258.30.001675
ORF7a38G38VgGagTa11B.1.3050.002151
ORF7a38G38VgGagTa11B.1.3190.003049
ORF7a38G38VgGagTa11B.1.3460.001311
ORF7a38G38VgGagTa11B.1.36.220.001208
ORF7a38G38VgGagTa11B.1.36.370.002778
ORF7a38G38VgGagTa11B.1.36.80.001
ORF7a38G38VgGagTa11B.1.3660.004878
ORF7a38G38VgGagTa11B.1.3690.000285
ORF7a38G38VgGagTa11B.1.3700.008
ORF7a38G38VgGagTa11B.1.3910.001127
ORF7a38G38VgGagTa11B.1.3960.000706
ORF7a38G38VgGagTa11B.1.3980.002976
ORF7a38G38VgGagTa11B.1.4000.000429
ORF7a38G38VgGagTa11B.1.400.10.015152
ORF7a38G38VgGagTa11B.1.4020.009804
ORF7a38G38VgGagTa11B.1.4040.001302
ORF7a38G38VgGagTa11B.1.4380.006536
ORF7a38G38VgGagTa11B.1.4670.04
ORF7a38G38VgGagTa11B.1.4680.005714
ORF7a38G38VgGagTa11B.1.4950.009091
ORF7a38G38VgGagTa11B.1.4970.000315
ORF7a38G38VgGagTa11B.1.4990.00105
ORF7a38G38VgGagTa11B.1.5090.000866
ORF7a38G38VgGagTa11B.1.5150.014493
ORF7a38G38VgGagTa11B.1.5380.008065
ORF7a38G38VgGagTa11B.1.5510.00129
ORF7a38G38VgGagTa11B.1.5950.000261
ORF7a38G38VgGagTa11B.1.595.10.005848
ORF7a38G38VgGAgTT11B.1.6090.000479
ORF7a38G38VgGagTa11B.1.6200.000946
ORF7a38G38VgGagTa11B.1.6230.000536
ORF7a38G38VgGagTa11B.1.6250.002353
ORF7a38G38VgGagTa11B.1.6280.000352
ORF7a38G38VgGagTa11B.400.000364
ORF7a38G38VgGagTa11C.10.002392
ORF7a38G38VgGagTa11C.36.30.000567
ORF7a38G38VgGagTa11C.40.01
ORF7a38G38VgGagTa11D.30.005917
ORF7a38G38VgGagTa11N.30.005814
ORF7a38G38VgGagTa11P.1.100.000269
ORF7a38G38VgGagTa11P.1.120.000484
ORF7a38G38VgGagTa11P.1.50.076923
ORF7a38G38VgGagTa11P.20.000187
ORF7a38G38VgGagTa11Q.30.000145
ORF7a38G38VgGagTa11S.10.00495

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.