CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = F6S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a6F6SnonsyntTctCc2802750.98214327409-27411
ORF7a6F6SnonsyntTCtCT28040.014285727409-27411
ORF7a6F6SnonsyntTCtCA28010.0035714327409-27411

Details of the mutation F6S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a6F6StTctCc275280All0.000053
ORF7a6F6StTCtCT4280All0.000001
ORF7a6F6StTCtCA1280All0
ORF7a6F6StTctCc106106AZ.60.890756
ORF7a6F6StTctCc5252B.1.1.70.000047
ORF7a6F6StTctCc1717B.1.2430.001183
ORF7a6F6StTctCc1111P.40.041825
ORF7a6F6StTctCc1010AY.430.000044
ORF7a6F6StTctCc1010B.1.1600.000312
ORF7a6F6StTctCc88AY.40.000012
ORF7a6F6StTctCc88B.1.1770.000105
ORF7a6F6StTctCc55AY.450.000608
ORF7a6F6StTctCc44AY.420.000161
ORF7a6F6StTctCc44B.1.617.20.000015
ORF7a6F6StTctCc23AY.440.000012
ORF7a6F6StTCtCT13AY.440.000006
ORF7a6F6StTctCc23B.1.5260.000047
ORF7a6F6StTCtCT13B.1.5260.000024
ORF7a6F6StTctCc33B.1.5950.000783
ORF7a6F6StTctCc33B.1.6210.000266
ORF7a6F6StTctCc12AY.1030.000006
ORF7a6F6StTCtCT12AY.1030.000006
ORF7a6F6StTctCc22AY.360.000296
ORF7a6F6StTctCc22B.1.10.000036
ORF7a6F6StTctCc22B.1.3240.00321
ORF7a6F6StTctCc22B.1.4290.000047
ORF7a6F6StTctCc22Q.40.00091
ORF7a6F6StTctCc11AT.10.005128
ORF7a6F6StTctCc11AY.1200.000037
ORF7a6F6StTctCc11AY.120.10.000321
ORF7a6F6StTctCc11AY.200.000039
ORF7a6F6StTctCc11AY.250.000006
ORF7a6F6StTctCc11AY.30.00001
ORF7a6F6StTctCc11AY.330.000067
ORF7a6F6StTctCc11AY.340.000097
ORF7a6F6StTCtCT11AY.790.001211
ORF7a6F6StTctCc11AY.990.001049
ORF7a6F6StTctCc11B.10.000009
ORF7a6F6StTctCc11B.1.1.3170.000412
ORF7a6F6StTctCc11B.1.1.3970.002252
ORF7a6F6StTctCc11B.1.1.540.003021
ORF7a6F6StTCtCA11B.1.20.000009
ORF7a6F6StTctCc11B.1.2210.000071
ORF7a6F6StTctCc11B.1.258.170.000104
ORF7a6F6StTctCc11B.1.2790.000514
ORF7a6F6StTctCc11B.1.5700.002941
ORF7a6F6StTctCc11P.1.140.000048
ORF7a6F6StTctCc11P.1.170.000162