CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = F54X

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a54F54XnonsyntTTtGA1660.37527553-27555
ORF7a54F54XnonsyntTTtAA1660.37527553-27555
ORF7a54F54XnonsyntTTtAG1640.2527553-27555

Details of the mutation F54X within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a54F54XtTTtGA616All0.000001
ORF7a54F54XtTTtAA616All0.000001
ORF7a54F54XtTTtAG416All0.000001
ORF7a54F54XtTTtGA615AY.250.000036
ORF7a54F54XtTTtAA515AY.250.00003
ORF7a54F54XtTTtAG415AY.250.000024
ORF7a54F54XtTTtAA11B.1.5880.00091