CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = F54T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a54F54TnonsynTTtACt320.66666727553-27555
ORF7a54F54TnonsynTTTACA310.33333327553-27555

Details of the mutation F54T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a54F54TTTtACt23All0
ORF7a54F54TTTTACA13All0
ORF7a54F54TTTtACt12AY.250.000006
ORF7a54F54TTTTACA12AY.250.000006
ORF7a54F54TTTtACt11B.1.617.20.000004