CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = E41del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a41E41del2delgAGg--32250.7812527514-27516
ORF7a41E41del2delGAg--g3220.062527514-27516
ORF7a41E41del2delGAG--A3220.062527514-27516
ORF7a41E41del2delGAGA--3220.062527514-27516
ORF7a41E41del2delGAG--N3210.0312527514-27516

Details of the mutation E41del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a41E41del2gAGg--2532All0.000005
ORF7a41E41del2GAg--g232All0
ORF7a41E41del2GAG--A232All0
ORF7a41E41del2GAGA--232All0
ORF7a41E41del2GAG--N132All0
ORF7a41E41del2gAGg--66AY.340.000582
ORF7a41E41del2gAGg--55AY.250.00003
ORF7a41E41del2gAGg--44AY.290.000063
ORF7a41E41del2GAG--A220.111111
ORF7a41E41del2gAGg--22AY.30.00002
ORF7a41E41del2gAGg--22AY.40.000003
ORF7a41E41del2gAGg--22AY.750.000112
ORF7a41E41del2GAGA--11AY.300.000396
ORF7a41E41del2gAGg--11AY.330.000067
ORF7a41E41del2GAG--N11AY.430.000004
ORF7a41E41del2gAGg--11AY.610.000105
ORF7a41E41del2GAg--g11AY.90.000068
ORF7a41E41del2GAg--g11B.1.1.3170.000412
ORF7a41E41del2GAGA--11B.1.4290.000024
ORF7a41E41del2gAGg--11B.1.617.30.002985
ORF7a41E41del2gAGg--11B.1.6210.000089