CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF7a : Mut = E41S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF7a41E41SnonsynGAGTCT23130.56521727514-27516
ORF7a41E41SnonsynGAGTCA2360.2608727514-27516
ORF7a41E41SnonsynGAGTCC2320.086956527514-27516
ORF7a41E41SnonsynGAgTCg2320.086956527514-27516

Details of the mutation E41S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF7a41E41SGAGTCT1323All0.000002
ORF7a41E41SGAGTCA623All0.000001
ORF7a41E41SGAGTCC223All0
ORF7a41E41SGAgTCg223All0
ORF7a41E41SGAGTCA49B.1.1.70.000004
ORF7a41E41SGAGTCT49B.1.1.70.000004
ORF7a41E41SGAgTCg19B.1.1.70.000001
ORF7a41E41SGAGTCT35AY.250.000018
ORF7a41E41SGAGTCA15AY.250.000006
ORF7a41E41SGAGTCC15AY.250.000006
ORF7a41E41SGAGTCT35B.10.000027
ORF7a41E41SGAgTCg15B.10.000009
ORF7a41E41SGAGTCA15B.10.000009
ORF7a41E41SGAGTCT34B.1.617.20.000011
ORF7a41E41SGAGTCC14B.1.617.20.000004